Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0821 ATGATGGAGAAGGAGAAGAAGCTGAGTTTTGTGAGGAATGGTGAACTTCGATTACCACCTGGGTTTCGATTTCATCCAACAGACGAAGAACTTGTGGTCCAATACTTGAAGCGAAAGGTCTTCTCTTATCCTTTGCCTGCGTCAATCATCCCTGAAGTTCATGTCTGCAAATCAGATCCTTGGGACTTGCCAGGTGATATGGAACAGGAGAGATATTTCTTCAGTACTAGAGAAGCTAAATACTCCAATGGAAGCCGATCCAACAGAGCAACGCATTCTGGGTATTGGAAAGCCACTGGTTTAGACAAGCAAATTCTGAATTCTAAGGGAAATCAAATCGTCGGCATGAAGAAAACTCTGGTTTTCTACAGAGGCAAGCCTCCTCATGGTTCTAGAACCGATTGGATCATGCACGAATATCGTCTTCATAATACACAGAGCTCTGTGGTGGGGATGCAGAACTGGGTTTTGTGTCGGATGTTCTTGAAGAGAAGAAGCACGGGTGGGAAGAGTGAGGAACAGAGTAGTTTCAGAGTGAGGAGGGAGATCAACAGTCACAACAAGGTGGTGATGATGAACAAGAAGACAAGGCCTGTGTTTTATGATTTCTTAGCACAGAGCAACAAGAAAAATAATAATACTACTGATTTGAATCGCACACCTAATACGACGTCGTCGGCTTCAAGCATCAGTGGAATAACACATCTCTCTTCTCCACACGAATCTGATGAGCGTGAAGAAAGCAGTAGTTGCAACAGCTTGCCGTCTCTTACAGGAAACCCGTGA 786 0.4427 MMEKEKKLSFVRNGELRLPPGFRFHPTDEELVVQYLKRKVFSYPLPASIIPEVHVCKSDPWDLPGDMEQERYFFSTREAKYSNGSRSNRATHSGYWKATGLDKQILNSKGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLHNTQSSVVGMQNWVLCRMFLKRRSTGGKSEEQSSFRVRREINSHNKVVMMNKKTRPVFYDFLAQSNKKNNNTTDLNRTPNTTSSASSISGITHLSSPHESDEREESSSCNSLPSLTGNP 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0821 261 Gene3D NAC domain 27 168 IPR036093 GO:0003677|GO:0006355
Lele23g0821 261 MobiDBLite consensus disorder prediction 210 237 - -
Lele23g0821 261 SUPERFAMILY NAC domain 10 163 IPR036093 GO:0003677|GO:0006355
Lele23g0821 261 Pfam No apical meristem (NAM) protein 19 142 IPR003441 GO:0003677|GO:0006355
Lele23g0821 261 MobiDBLite consensus disorder prediction 210 261 - -
Lele23g0821 261 ProSiteProfiles NAC domain profile. 18 163 IPR003441 GO:0003677|GO:0006355
Lele23g0821 261 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 17 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0821 Lele-ChrLele23 11014305 11015267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0821 8 254 NAC Transcription Factor Family AT5G13180 59.533 8.96e-101 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele23g0821 NAM 5.8e-36 No_clan