Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0812 ATGGTTGGTCCCAAATCGCAGAGCCCCGAAAGCGTTCCTTGCGATTTCTGTACACAACAAACAGCTGTTCTGTATTGCAGAGCTGACTCCGCCAAGCTCTGTTTGTTCTGCGATCAACACGTTCATTCCGCTAACTTGCTCTCTCGCAAGCACTTGCGCTCTCAGATCTGTGATAATTGCACCTCCGAGCCCGGCTCCGTCCGATGTAACACCGACAACCTTGTTCTCTGCCAAGACTGCGATTGGGACGCTCACGCCTCCAGCTCCGTCGCCGCCTCTCACCACCGTACCCCTGTTGAGGGTTTCACTGGGTGTCCCTCTGCATCTGAACTCGCTTCGCTTTGGGGATTTCATTTTGAGAATAAGACTTTAGATCAATCTCCTTCTTCTTCTTTGATTCAAAACTGGGGTGATTATCGGGATTTGTTTGTGCCACTTGAGTCCTGCCTGTTTAAATCCGATGGCGTTCCTCTTCAAGTTCATGACCTCATGGTTCCCCGAGAAACCGGTATGGTTTACCCGTCTCGGGATTTCCAGGCGGTTTGTAACGCTACAAAGAAACAGACTCCGTGCTGTGGGAAGCAGAAACAGGTTATACATAAGCAGCTGGTTGAATTGCTCAAGAGGGATTCGGTGGTTATTGATATTGGCGTTGGTGGCGGTGGCGGTGGCTGTGGCGGTGATGTTGACGGTGATTGTGGTGCTATTCGAACTCGGATAACTGCTGTTAGTGAGGCTGAGAATTTGGTTCCGGAAGCGCCGAGAAAGAGCCAGGGAGATGGGCAACCATTTGTTTTGGGTAATGAGGTTCAGGGATTACCGGTGAGTACTGCTTCTCAGCAACCATTGCAGCAACAAGCACCAGTCAATTCTCCGTTTATGATGCCTTCGCAGTTGCATCATGATGAAGGCGATCGATTGTGGCACAATAATTCCAACAGGCACTCTGTTCAGATATGGGATTTCCATTCTGGACGACTAAGGGATCAAGAAGAATCAAGTGCACTTGAAGCTGCCTATGTAGCAAATGATGCCGGATTTGTGGCTAAGAACTTTAGTGAACTTATCAGAGAATCATCCATGTCCGACGTTAAATTATTGCAAGATATATACGATATGAATATCACGTACAATGATATGGCATCATATAACAACATGTCAAATAAGCCAACAACAACAAGTCAGGGCCCTGCAGCAACATCAGAGAGCAACAACCTACCAACAAGAAAGCAATCTGGGCAAAAAGGTAACTGCAGTGTCAAGGAGACACAGATTGGGGAACATCCTTTGCTTGTTACAGGTGAACACTTGGGAAAAGCAGGACGAAGTAAGGCTGACATGGACCTGTTGGCCCAAAACAGGGGCACTGCAATGCTCCGTTACAAGGAGAAAAAGAAAACTCGAAGATACGAGAAGCACATAAGATATGAGTCTAGGAAGATGAGGGCTGATACTCGGAAACGAGTCAAAGGCCGATTTGTGAAGGCTAGTGACGTGGACGCACCTCCTAATGGTTAA 1518 0.4776 MVGPKSQSPESVPCDFCTQQTAVLYCRADSAKLCLFCDQHVHSANLLSRKHLRSQICDNCTSEPGSVRCNTDNLVLCQDCDWDAHASSSVAASHHRTPVEGFTGCPSASELASLWGFHFENKTLDQSPSSSLIQNWGDYRDLFVPLESCLFKSDGVPLQVHDLMVPRETGMVYPSRDFQAVCNATKKQTPCCGKQKQVIHKQLVELLKRDSVVIDIGVGGGGGGCGGDVDGDCGAIRTRITAVSEAENLVPEAPRKSQGDGQPFVLGNEVQGLPVSTASQQPLQQQAPVNSPFMMPSQLHHDEGDRLWHNNSNRHSVQIWDFHSGRLRDQEESSALEAAYVANDAGFVAKNFSELIRESSMSDVKLLQDIYDMNITYNDMASYNNMSNKPTTTSQGPAATSESNNLPTRKQSGQKGNCSVKETQIGEHPLLVTGEHLGKAGRSKADMDLLAQNRGTAMLRYKEKKKTRRYEKHIRYESRKMRADTRKRVKGRFVKASDVDAPPNG 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0812 505 Pfam B-box zinc finger 55 97 IPR000315 GO:0008270
Lele23g0812 505 Pfam CCT motif 454 496 IPR010402 GO:0005515
Lele23g0812 505 MobiDBLite consensus disorder prediction 386 421 - -
Lele23g0812 505 CDD Bbox1_BBX-like 13 56 - -
Lele23g0812 505 ProSiteProfiles Zinc finger B-box type profile. 9 56 IPR000315 GO:0008270
Lele23g0812 505 SMART bboxneu5 9 56 IPR000315 GO:0008270
Lele23g0812 505 SMART bboxneu5 57 99 IPR000315 GO:0008270
Lele23g0812 505 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270
Lele23g0812 505 MobiDBLite consensus disorder prediction 386 431 - -
Lele23g0812 505 MobiDBLite consensus disorder prediction 477 505 - -
Lele23g0812 505 ProSiteProfiles CCT domain profile. 454 496 IPR010402 GO:0005515
Lele23g0812 505 MobiDBLite consensus disorder prediction 477 495 - -
Lele23g0812 505 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 13 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0812 Lele-ChrLele23 10823566 10827004 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0812 8 502 C2C2-CO-like Transcription Factor Family AT1G28050 40.278 4.65e-98 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Lele23g0812 CCT 1.9e-15 CL0281