Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0800 ATGGCCATACCTTCTGAGCTCAGCCTTGATTGCAAACCCCACCACAGCTTTTCCATGCTTCTCAAATCTTTTCCACCCCATCTCGCTGATCAAACTCACAACCTCACGCTCGAAGAATTCGTTTCTCGCCTTGAAGATGAACGCCTCAAGATCGATGCCTTCAAGCGCGAGCTTCCTCTCTGCATGCAACTTCTCACCAACGCTATGGAGGAGTCAAGGCAGAAACTTGAGGCTTTGAGAGGAAATGAAGGCAAGAAAAGTGCAGTTCTGGAAGAATTCATACCCTTAAAGCATTCATCAACTTGTGAAAGCTCTGATAAAGCATTAAGCAATTGTGATAAAGCTAATTGGATGATATCTGCTCAGTTATGGAGCCAAGCTAGTGAAGAAACCAGTAAAGAATATTCCACAATTGGATCCGCTAATAACAATAAAGAAGCTGATCATGATCAGATTGGTGGGTTCGATGTTAGCCCTAATAATCTTCACAGAAATATTAGTGGAGGAGCCTTTCTTCCATTCACAAATAATAAGGAACGAATTAGCTCAAACCAGTGTTCTTCATCGACGCCATTGCAGGCTCTTCCGGAGCTGGCACTTGCCTCTGTTGTTGAGAAACGAATGGAGGAGAAGAAATTATACTCAGAGACGATTGATAATTCTGGTAAAGGAGGAAGCAATATTAATGGTGGTTGGGTGGGGTGTGATCAAGGAAAAGGGATGATTACAGTTTCTTCGTGTGAGGCAAAAACAACAAGTAAAACTGCTTCGACGTCTCCCATCACTACACAAAGTCAACGGAAAGCAAGAAGGTGTTGGTCACCGGGCTTGCACCGGCGATTTGTGAATGCTCTTCAGATGCTTGGTGGATCTCAAGTGGCCACTCCGAAACAGATTAGGGAGCTGATGAAGGTTGAAGGACTGACCAATGATGAAGTTAAAAGTCATCTCCAGAAATATCGTCTCCACACAAGAAGACCTGGTACAAACCTGCAAGTAGCTGGGGCAGCAGCACCTCAGCTTGTAGTCCTGGGAGGAATATGGGTCCCACCCGCAACAGGCACCACTAACGCGCTCTTCAGCCCACACCCTGTCTCACACGCGCCGCCGCCACACTACTTCCCTCCCGCCCCTCCGGCCGAAGACTTGTTGTACCCCATCTCAACACAATCACACAACCATATCCTCCACCACCAACAACTTCTCAATGGGTACAAAACGACGTCGCAGAGGCAGAGATCACCAGAGTCCGAGAGCATGGAAAGATGGGAAATCAGAGGGTAG 1284 0.4696 MAIPSELSLDCKPHHSFSMLLKSFPPHLADQTHNLTLEEFVSRLEDERLKIDAFKRELPLCMQLLTNAMEESRQKLEALRGNEGKKSAVLEEFIPLKHSSTCESSDKALSNCDKANWMISAQLWSQASEETSKEYSTIGSANNNKEADHDQIGGFDVSPNNLHRNISGGAFLPFTNNKERISSNQCSSSTPLQALPELALASVVEKRMEEKKLYSETIDNSGKGGSNINGGWVGCDQGKGMITVSSCEAKTTSKTASTSPITTQSQRKARRCWSPGLHRRFVNALQMLGGSQVATPKQIRELMKVEGLTNDEVKSHLQKYRLHTRRPGTNLQVAGAAAPQLVVLGGIWVPPATGTTNALFSPHPVSHAPPPHYFPPAPPAEDLLYPISTQSHNHILHHQQLLNGYKTTSQRQRSPESESMERWEIRG 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0800 427 Gene3D - 267 325 - -
Lele23g0800 427 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 268 323 IPR006447 GO:0003677
Lele23g0800 427 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 31 390 IPR044787 GO:0003700|GO:0006355
Lele23g0800 427 Coils Coil 62 82 - -
Lele23g0800 427 SUPERFAMILY Homeodomain-like 266 326 IPR009057 -
Lele23g0800 427 FunFam Myb family transcription factor 267 325 - -
Lele23g0800 427 MobiDBLite consensus disorder prediction 403 427 - -
Lele23g0800 427 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 265 325 IPR017930 -
Lele23g0800 427 Coils Coil 37 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0800 Lele-ChrLele23 9248857 9251541 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0800 1 373 G2-like Transcription Factor Family AT2G03500 46.056 5.19e-94 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele23g0800 None None None