Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0778 ATGGCTGGTAATGTTGTGGGAAACTTGAATGGGAATGGAACATTTGCAGTGGGGTCATCAACATCTGGATCAGTGAAGAGAAGCAGAACACATAGCGGTGGAATCCAAGTTGCTTCATGTTTGGTTGATGGATGCAGTTCAGACCTTAGTAAATGCAGAGACTATCACAGACGCCACAAGGTTTGTGAACTTCACTCTAAGACCCCTAAGGTCACAGTCAGGGGTCAGGAACAACGCTTCTGCCAGCAGTGTAGCAGGTTCCATTCATTGGAGGAGTTTGATCAAGGAAAGCGAAGCTGCAGGAAACGTCTTGACGGGCACAACCGACGCCGGAGAAAGCCTCAACTGGAACCCCTGCCAATGACCCCAGCAAGATTTCTTGCTGAGTACCCAGGTACCAGAATCTCAGCATTCAACAATCCACAAATACTCCCAACAGGTCCTAGTTTGAGCAGTGCTTGGGGTGGGCCTATTAAAGCTGAGAATGATTATGTTTCCTTCAAGCTTGATAATGGCAGAAATGGGCCAATTGGTGAAACTCTGAGTGAGCAAGGACGCCAGGGACAGAGACAAATTTCATTTCTTCAAAGCCCCAAATCTTCACTCTATGGATATTCTGCCAGTGAACTGAACTTAAATTCCAACTTTTCATCAGAAAATGCAGGCAACAACAATCACAACAATAACAACAACAATCAGAAAGCATTCTCATATTGTGTTCGCTCTCTTCTGTCATCAACACAACCACCTGAGACTCATGAGGTTGGATATGAAATCCATCAAGCTTTGAACATGAATGCTACAGAAATGGTGAGCCATGGCCATAATAATACTAGTAATTGTGAGGGGATGATGTTTAGTATTGGATCTGATGGGTCTCCTTCACGTGGTTCTTCCCATAAACTCTTCATGTGGGAGTAA 921 0.4463 MAGNVVGNLNGNGTFAVGSSTSGSVKRSRTHSGGIQVASCLVDGCSSDLSKCRDYHRRHKVCELHSKTPKVTVRGQEQRFCQQCSRFHSLEEFDQGKRSCRKRLDGHNRRRRKPQLEPLPMTPARFLAEYPGTRISAFNNPQILPTGPSLSSAWGGPIKAENDYVSFKLDNGRNGPIGETLSEQGRQGQRQISFLQSPKSSLYGYSASELNLNSNFSSENAGNNNHNNNNNNQKAFSYCVRSLLSSTQPPETHEVGYEIHQALNMNATEMVSHGHNNTSNCEGMMFSIGSDGSPSRGSSHKLFMWE 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0778 306 Gene3D - 31 101 IPR036893 GO:0003677|GO:0005634
Lele23g0778 306 ProSiteProfiles Zinc finger SBP-type profile. 37 114 IPR004333 GO:0003677
Lele23g0778 306 FunFam Squamosa promoter-binding-like protein 14 31 101 - -
Lele23g0778 306 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 20 296 IPR044817 GO:0003677
Lele23g0778 306 SUPERFAMILY SBT domain 38 118 IPR036893 GO:0003677|GO:0005634
Lele23g0778 306 Pfam SBP domain 40 113 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0778 Lele-ChrLele23 6773284 6774744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0778 36 155 SBP-box Gene Family AT5G50670 61.157 9.35e-49 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele23g0778 SBP 2.2e-30 No_clan