Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0772 ATGCAAACTGGTTACAATATTAATGATCTGTACCAAGAAGCTCAAACACGATGGCTGAAGCCTGCAGAAGTGATGTACGTTTTACAGAATCATGAACAGTATCAGATTACTCAAGAGAACCCTCAACAGCCACCCAGTGGATCCTTGTTTCTGTTTAACAGAAGAGTTCTGCGCTTTTTTCGCAAAGATGGTCATAATTGGCGGAAGAAAAAAGATGGAAGAACTGTGGGAGAAGCACATGAACGACTTAAGGTTGGAAATGTTGAGGCCTTAAATTGTTATTATGCACATGGAGAGCAGAACCCCACTTTTCAGAGGCGGAGCTATTGGATGTTGGATCCGGCTTATGAGCATATTGTTCTGGTACATTACAGAGAAACAAGTGAGGGAAGGTCCAATTCTGGCCATGTCACACAACAATCACCAGGATCCTCATCTACATTTAGTCAGGGTCCTAGCTCATACACTACCCTGAAGCTAGGGTCAACACCCATGTTTGGTGATTCATATGAACCTAATCAGAGTTTCTCCACTCCTGGATCGGTAGAATTCACATCTGATACAGTCATCAAGAATAATGTAATAGATAACTTGGATGGAATAGAGGCAGAGTCAGGAAATTCACCTGAACTTGAGGTTACTCAAGCCTTACGCCGACTGGAGGAGCAGTTAAGTTTGAATGAGGACAGCTTCAGAGAAATTGATTCCTTCAGCAGCGAACAGGAGAACACACATGATTCTAGTGCCCAACAAAATATAATGGCAATCAACAGTCAAGATATTACTGCAGCTTGGCCTGCACTGAGTGATCACAGCCAACCTTATGATGGACATGTTGCCAGACAAGACCATAATTGCTCTGGTGGAAGTGGAACTGAGAAGACTTTATACTGGAAGGAGATGCTAGATTCGTTCAAGCCCTTGTCCTCGGCTAATTTGCAAGAGAAACACGTGTACAAACCTGCTGGAAATGGAAACTCACTTTCTTCTTCGGGAAGGTTACCAATGGCCAACCTGGAAAGCAGTCACTGGATCAGCTTTGGCAGTAACAATGATGAAAACTCTTCCTACTCATTGACTCAAGACACTCATGGAGTCAGATTTTCTCCATATTCTTCTATAGAAACTCAAGAAGCTCATTTGGACTGTTATGCATCATATTTTGACCAAAACCAAATTGAAGCTCCTCTGGATGTAGATTTAGGTTTGACTGTTGCACAAAAGCAGAAGTTCACAATTAAGGAAGTATCTCCAGAATGGGGTTATGCTACTGAAGTCACGAAGGTTATCATTGTTGGATCATTTCTCTGTCATCCCACGAGTTCTACCTGGGCTTGTATGTTTGGTGATGTTGAAGTTCCTGTTGAAATAATTCAAGATGGTGTGATCCGTTGTGAAGCTCCATCTCACCTTCCTGGAAAGGTCACTCTCTGCATTACATCTGGGAATCGAGAGTCCTGCAGTCAAGTTCGTGAGTTTGAGTATCGCAATAAGGATAGTTGCCCCCACTGCAATTCATTAGAAACAGAATCCGCTAGAAGTCCTGAAGAACTTTTATTACTTGTTAGATTTGCTCAGATGATTTTTTCTGATTCTTCCACGATGGAATCTGGAAATTATGAACTGGGAAAACGGAAATTTGATGATGATTCCTGGAGCCATGTTATTGAGGCTCTTCTAGTTGGCAGTGGAACTTCATCTGGTACTGTTGATTGGCTTCTTGAAGAGCTTTTAAAGGATAGGCTGCAGTTGTGGCTTTCTTCCAGATCCCACAAAATAAATGATGAGACAGGCTCTTCTTTGTCCAAAATGGAGCAGGGCATTATACATATGGTTGCTGGGTTGGGTTTTGAGTGGGCTTTGAACCCCATTCTCAGCTGTGGTGTGAACATAAATTTCCGTGACATCAACGGATGGACTGCCCTGCATTGGGCTGCACGATTTGGGAGGGAAAAAATGGTTGCTTCACTTATAGCTTCTGGTGCATCTGCTGGAGCAGTGACAGATCCAACTAACCAAGATCCAACTGGTAAAACGGCTGCTTCTATTGCAGCCAACAGTGGGCATAAGGGTTTGGCAGGTTATCTTTCAGAAGAATCTCTAACGAGCCATTTATCTTCGCTCACCCTGGAAGAAAGCGAGCTGTCTAAAGGTTCTGCTTTGCTTGAAGCAGAGTTAGCTGTTAGTACTGTCTCCAATGAGCATCTAACAGCCGGTGAAGATCAGATTTCACTCAGACATACCTTGGCTGCTGTGCGTAATGCAGCTCAGGCAGCTGCACGTATACAGTCTGCTTTTCGTGCACATTCCTTTAGGAAACGGAGAGAGAGAGAAGCTGCCATTTCTGCAGCAGCCGCCATATCAATTCAGAAGAAATATCGGGGATGGAAAGGCCGCAAAGATTTTTTGGCATTACGTAAGAAAGTAGTGAAGATACAGGCTCATGTAAGGGGTTACCAGGCTAGAAAGCATTACAGGATAATATGTTGGGTTGTTGGGTTCTTTGACAAGGCTGTGCTACGATGGAGAAGGAGAGGAGCTGGTTTACGGGGTTTTCGACAGGAGAGAAACTCAATTGATGAAAATGAAGATGAAGATATTCTCAAGGTGTTCCGAAAACAGAAAGTAGATGATGCAGTTGAACAGGCTGTTTCACGGGTTCTGTCCATGGTTGATTCTCCAAATGCTCGTCAACAATATCATCGTATGCTTGAAAAGTTTCGTCAAGCCAAGGCTGAACTCGGCAGCACGAGTCAAGGAGTACCGTTGTCTTTTCTGAAGGATGCTTCCAATATGGAAGATGATGACTTAAATCAGTTTCCCTAG 2826 0.4342 MQTGYNINDLYQEAQTRWLKPAEVMYVLQNHEQYQITQENPQQPPSGSLFLFNRRVLRFFRKDGHNWRKKKDGRTVGEAHERLKVGNVEALNCYYAHGEQNPTFQRRSYWMLDPAYEHIVLVHYRETSEGRSNSGHVTQQSPGSSSTFSQGPSSYTTLKLGSTPMFGDSYEPNQSFSTPGSVEFTSDTVIKNNVIDNLDGIEAESGNSPELEVTQALRRLEEQLSLNEDSFREIDSFSSEQENTHDSSAQQNIMAINSQDITAAWPALSDHSQPYDGHVARQDHNCSGGSGTEKTLYWKEMLDSFKPLSSANLQEKHVYKPAGNGNSLSSSGRLPMANLESSHWISFGSNNDENSSYSLTQDTHGVRFSPYSSIETQEAHLDCYASYFDQNQIEAPLDVDLGLTVAQKQKFTIKEVSPEWGYATEVTKVIIVGSFLCHPTSSTWACMFGDVEVPVEIIQDGVIRCEAPSHLPGKVTLCITSGNRESCSQVREFEYRNKDSCPHCNSLETESARSPEELLLLVRFAQMIFSDSSTMESGNYELGKRKFDDDSWSHVIEALLVGSGTSSGTVDWLLEELLKDRLQLWLSSRSHKINDETGSSLSKMEQGIIHMVAGLGFEWALNPILSCGVNINFRDINGWTALHWAARFGREKMVASLIASGASAGAVTDPTNQDPTGKTAASIAANSGHKGLAGYLSEESLTSHLSSLTLEESELSKGSALLEAELAVSTVSNEHLTAGEDQISLRHTLAAVRNAAQAAARIQSAFRAHSFRKRREREAAISAAAAISIQKKYRGWKGRKDFLALRKKVVKIQAHVRGYQARKHYRIICWVVGFFDKAVLRWRRRGAGLRGFRQERNSIDENEDEDILKVFRKQKVDDAVEQAVSRVLSMVDSPNARQQYHRMLEKFRQAKAELGSTSQGVPLSFLKDASNMEDDDLNQFP 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0772 941 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 759 831 IPR027417 -
Lele23g0772 941 Gene3D - 561 700 IPR036770 -
Lele23g0772 941 ProSiteProfiles IQ motif profile. 805 829 IPR000048 GO:0005515
Lele23g0772 941 Gene3D - 782 828 - -
Lele23g0772 941 SMART iq_5 804 826 IPR000048 GO:0005515
Lele23g0772 941 SMART iq_5 781 803 IPR000048 GO:0005515
Lele23g0772 941 SMART iq_5 754 776 IPR000048 GO:0005515
Lele23g0772 941 SMART CG_1_2 10 128 IPR005559 GO:0003677
Lele23g0772 941 ProSiteProfiles CG-1 DNA-binding domain profile. 7 133 IPR005559 GO:0003677
Lele23g0772 941 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 6 913 - -
Lele23g0772 941 ProSiteProfiles Ankyrin repeat profile. 637 669 IPR002110 GO:0005515
Lele23g0772 941 Pfam Ankyrin repeats (3 copies) 619 698 IPR002110 GO:0005515
Lele23g0772 941 Pfam CG-1 domain 13 126 IPR005559 GO:0003677
Lele23g0772 941 ProSiteProfiles IQ motif profile. 755 784 IPR000048 GO:0005515
Lele23g0772 941 Pfam IQ calmodulin-binding motif 784 802 IPR000048 GO:0005515
Lele23g0772 941 Pfam IQ calmodulin-binding motif 806 826 IPR000048 GO:0005515
Lele23g0772 941 CDD IPT 412 496 - -
Lele23g0772 941 SMART ANK_2a 676 705 IPR002110 GO:0005515
Lele23g0772 941 SMART ANK_2a 637 666 IPR002110 GO:0005515
Lele23g0772 941 FunFam Calmodulin-binding transcription activator 2 781 829 - -
Lele23g0772 941 SUPERFAMILY Ankyrin repeat 605 698 IPR036770 -
Lele23g0772 941 FunFam Calmodulin-binding transcription activator 4 isoform A 519 702 - -
Lele23g0772 941 ProSiteProfiles IQ motif profile. 782 811 IPR000048 GO:0005515
Lele23g0772 941 ProSiteProfiles Ankyrin repeat region circular profile. 637 663 - -
Lele23g0772 941 Pfam IPT/TIG domain 412 495 IPR002909 -
Lele23g0772 941 FunFam Calmodulin-binding transcription activator 2 406 500 - -
Lele23g0772 941 SUPERFAMILY E set domains 412 496 IPR014756 -
Lele23g0772 941 Gene3D Immunoglobulins 406 500 IPR013783 -
Lele23g0772 941 MobiDBLite consensus disorder prediction 130 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0772 Lele-ChrLele23 6642847 6665830 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0772 5 941 CAMTA Transcription Factor Family AT1G67310 50.000 0.0 874
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Lele23g0772 CG-1 6.8e-50 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1265 21 20469597 20489956 Lele23g0772 23 6642847 6665830 hybridization
Lele22g1248 22 13780774 13791431 Lele23g0772 23 6642847 6665830 hybridization