Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0763 ATGGACTGGAATGCAAATTCTTTCTCGCTGTGGGACTGGGAACACCTACTTTTTAACACAAAAGCAACTGAGAATCCTAGGTTAAAGCCAGTGGATTGGAGTGGCAAAGCAGATGGAGAATTCAATGTTGGGCTGTTCAATCCATCTGGTGGTATTGATAGTTCTGGGTCTGACTTACAGCATGTTTCTTCATCAAGGGGCTCAAAATCAGCCTCCATGAATTCTTCATCAAATGGGTATAGCAGAACATCGGGGCTCACTTTTGGAGCGGAAGGCTCCCAAGATGATTCTAATGGTAAGAAAGAGAGGTCAAAAGAAGAGCCTGTTGGAAATTCTCCCACACTTGAACATTCTTCTGTCTCTGGTGAACCATTGCACAGTCTAAAGCTTGGCAAACGGCTGTACTTTGAAGATGTCTGTGTTGGAAGTGATACAAAGAACACATCTCACTCTGGAATTCCCATGCCATCTTTGAGTACTGGGAAAAAATGCAAGTCAAATAGTCAGAGCTCACAACCTCTACACTGCCAGGTTGAAGGCTGTAACCTTGACCTATCATCAGCTAAAGATTACCATCGCAAGCATAGAGTTTGTGAAAGTCATTCCAAATCCCCTAATGTTGTTGTAGATGGTAAGGAGCGTCGATTTTGCCAGCAATGTAGCAGGTTCCATGGTCTCTCAGAGTTTGATGGGAAAAAAAGAAGTTGCCGGCGTCGTCTTTCTGATCATAATGCTAGGCGTCAGAAGCCTCATTCTGAAGCTGTCCAGTTGAATGCATCATATTTGTCCTCATCACCGTACGATGGGAGGCAACAGATGAGCCCATTTCCTAACTCAAGGACTGCTATCAACTTCGCTTGGCCGGATACATACAGCAGCAGGATCTCCCAAACGAAAGAATTTCTCATGAAACCTGCAAAAGTAGGAGGTACCATTGGGCAGGTGCAACAGCCCTTCAATGAGATCCCAAGTACCTTTTCTAAGACTTCTAAAGGTTCCGTTGGCCTTTGCACATCCAAAGCCATACCAACAAAGACAATAAATCCAGGGATGCAAGATTTCATTACCTCATCAGATCCGAACGCTCTACAAAATTTTCACCATGCTCTCTCTCTTCTGTCAACCACCACCTCTTGGGGTCCATACGACGCAAAGTTTGCTTCTGAAGAGCACTCCAATCGCACGACACAGGCAGTAACGCACTCAATGATTCAGTGCACGCCTTATGCTTCATCAGACTACTGGCAGGCTTGTCAACAACCAGTCTTATTCTCAGACTGTAAAGATGACAGTCACTCTGAAAATTTCCAGCTGCTTAGAGGACCCTATGACTCTGGCTTTTGCAACCAGTTGGATTAA 1359 0.4481 MDWNANSFSLWDWEHLLFNTKATENPRLKPVDWSGKADGEFNVGLFNPSGGIDSSGSDLQHVSSSRGSKSASMNSSSNGYSRTSGLTFGAEGSQDDSNGKKERSKEEPVGNSPTLEHSSVSGEPLHSLKLGKRLYFEDVCVGSDTKNTSHSGIPMPSLSTGKKCKSNSQSSQPLHCQVEGCNLDLSSAKDYHRKHRVCESHSKSPNVVVDGKERRFCQQCSRFHGLSEFDGKKRSCRRRLSDHNARRQKPHSEAVQLNASYLSSSPYDGRQQMSPFPNSRTAINFAWPDTYSSRISQTKEFLMKPAKVGGTIGQVQQPFNEIPSTFSKTSKGSVGLCTSKAIPTKTINPGMQDFITSSDPNALQNFHHALSLLSTTTSWGPYDAKFASEEHSNRTTQAVTHSMIQCTPYASSDYWQACQQPVLFSDCKDDSHSENFQLLRGPYDSGFCNQLD 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0763 452 MobiDBLite consensus disorder prediction 49 94 - -
Lele23g0763 452 Gene3D - 166 237 IPR036893 GO:0003677|GO:0005634
Lele23g0763 452 MobiDBLite consensus disorder prediction 95 110 - -
Lele23g0763 452 MobiDBLite consensus disorder prediction 145 166 - -
Lele23g0763 452 Pfam SBP domain 176 249 IPR004333 GO:0003677
Lele23g0763 452 SUPERFAMILY SBT domain 174 254 IPR036893 GO:0003677|GO:0005634
Lele23g0763 452 MobiDBLite consensus disorder prediction 49 124 - -
Lele23g0763 452 FunFam Squamosa promoter-binding-like protein 14 167 237 - -
Lele23g0763 452 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 57 400 IPR044817 GO:0003677
Lele23g0763 452 ProSiteProfiles Zinc finger SBP-type profile. 173 250 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0763 Lele-ChrLele23 6488999 6491673 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0763 1 416 SBP-box Gene Family AT5G43270 38.799 3.69e-62 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele23g0763 SBP 9.7e-32 No_clan