Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0758 ATGGGTTGCGTCAACACTACACTCTCTCCCCCTCGCAAACAGGACCATGGCTCTGGTGGTCAAAGCTGGGCAGCCAAACACACGAGTCGCGGCTATAATTATCAGAAGACACTTTCTGATAGCATGCCACATCATAGGGTTTCAACTTCAAGAACAATAGATAATGTTGGTGGTGGAGATGGTGGTGTGAGAGAAGAAGCGCGAGGAGAAAGGGCGGTTGCCGGAGCAGAGAAACACGAGGTTGGCAATGTTTCAAAGAGATTCGTGGACAAGAAGATTGGAAAAGATGTGTATGTGGGTGGTTGGCCTGAGTGGGTGGTCGATAATATTCCTGCAAATGTTCTGGCTGTCCTGGCCCCCAAGAGTGCTGATTGTTATGAAATGCTTGCTAAGATAGGGCGTGGAACATATAGCAACGTGTACAAAGCTAGAGAAAAGGCGACGGGAAAGATTGTTGCCATGAAGAAGGTTCGGTTTGACACATCTGATTCAGAAAGTATAAAGTTCATGGCCAGAGAAATCGTGATTCTGCAGAAGCTCGACCATCCCAATGTCATCAAGCTTGAAGGCATTGCCACCTCAAGGATGCAGTATAGTCTCTACCTAATCTTTGAATACATGCTGTCCGACCTTACTCGTGTCATCACCCGCTCCGACGAGAGACTCACCGAACCACAGATTAAGTGTTATATGCAGCAATTGCTTTCTGGACTTGAGCATTGCCATGAGAGAGGAGTGATGCACCGAGACATCAAAGCTTCAAACTTGTTAATAGACAAGAAAGGGGTTCTGAAAGTTGCAGATTTCGGTCTTGCAAATTCCTTCGATCTCAAACCAAAAGGGCCTTTCACCAATCGAGTGGTGACACTCTGGTATAGAGCTCCTGAATTACTTTTGGGTTCAACTGATTATGGATTCGCCATTGATCTCTGGAGTGCTGGATGCCTCTTGGCTGAGATGTTTTTCGGAAAGCCCGTCATGCCAGGCAGGACTGAGGTTGAACAACTACACATGATCTTCAAACTATGTGGTTCTCCAACGGAGGATTACTGGAAGAAATTGAAGCTAATCACAAGTTACAGGCCACCAAATTACAAACCTAATTATGATGAAACCTTCGGGGAGCTCCCTTCCTCTTCTATTGGCCTCTTAACTACGCTTCTTGATCTTGATCCTAACTATCGTGGCACTGCTGCCTCCGCTCTCCAATCTGAATTCTTCAAGACTAGTCCTTTACCATGCCCTCTTTCAGCTCTAACATTAATACACAAAGAGGAGGATGAGCGCTCACATACTAAAAGACGCAGAAAGCATAGGTCATCCAAGAAAGGACAAATACCCCGGCCAAGTAACATGACTCATCCTGGAAAGAATAAAGCCGTGAGAAATTCAGAATATGAAATCATGCACCATGAACAGAAAAAGAATGAAGAAGGAAGCATGTATGGGTTAGAAACGGGGAATACCACAGAAGAGGGCTTGAATAACACATCATTGACTCTGTCTCCAGTTTTTTTTTCAAGTGGTGATAAAAGATCTCCCAGGACTGAAGCACATCCTAATGCTCTCAAGAACGTCAAGAACTTTAGCATAAGCTACTTGCAGGCCATGAATGAATCGGCTCAATATCGTCGATCCTTTTCTGATGTTGATTATCGGTTTGATCCGGATAAGTAA 1677 0.4484 MGCVNTTLSPPRKQDHGSGGQSWAAKHTSRGYNYQKTLSDSMPHHRVSTSRTIDNVGGGDGGVREEARGERAVAGAEKHEVGNVSKRFVDKKIGKDVYVGGWPEWVVDNIPANVLAVLAPKSADCYEMLAKIGRGTYSNVYKAREKATGKIVAMKKVRFDTSDSESIKFMAREIVILQKLDHPNVIKLEGIATSRMQYSLYLIFEYMLSDLTRVITRSDERLTEPQIKCYMQQLLSGLEHCHERGVMHRDIKASNLLIDKKGVLKVADFGLANSFDLKPKGPFTNRVVTLWYRAPELLLGSTDYGFAIDLWSAGCLLAEMFFGKPVMPGRTEVEQLHMIFKLCGSPTEDYWKKLKLITSYRPPNYKPNYDETFGELPSSSIGLLTTLLDLDPNYRGTAASALQSEFFKTSPLPCPLSALTLIHKEEDERSHTKRRRKHRSSKKGQIPRPSNMTHPGKNKAVRNSEYEIMHHEQKKNEEGSMYGLETGNTTEEGLNNTSLTLSPVFFSSGDKRSPRTEAHPNALKNVKNFSISYLQAMNESAQYRRSFSDVDYRFDPDK 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0758 558 MobiDBLite consensus disorder prediction 1 55 - -
Lele23g0758 558 SMART serkin_6 126 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g0758 558 MobiDBLite consensus disorder prediction 423 460 - -
Lele23g0758 558 FunFam probable serine/threonine-protein kinase At1g54610 113 208 - -
Lele23g0758 558 ProSitePatterns Protein kinases ATP-binding region signature. 132 155 IPR017441 GO:0005524
Lele23g0758 558 PANTHER CELL DIVISION PROTEIN KINASE 124 413 - -
Lele23g0758 558 MobiDBLite consensus disorder prediction 1 71 - -
Lele23g0758 558 ProSiteProfiles Protein kinase domain profile. 126 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g0758 558 Gene3D Phosphorylase Kinase; domain 1 116 208 - -
Lele23g0758 558 SUPERFAMILY Protein kinase-like (PK-like) 120 413 IPR011009 -
Lele23g0758 558 FunFam Putative serine/threonine-protein kinase 209 445 - -
Lele23g0758 558 Pfam Protein kinase domain 126 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g0758 558 Gene3D Transferase(Phosphotransferase) domain 1 209 446 - -
Lele23g0758 558 ProSitePatterns Serine/Threonine protein kinases active-site signature. 246 258 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0758 Lele-ChrLele23 6418914 6421226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0758 117 449 Core Cell Cycle Gene Families AT5G10270 44.538 1.53e-95 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Lele23g0758 Pkinase 5.8e-71 CL0016