Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0748 ATGGCGGAAGAAGAGAAAGATAGCTCGATGCGACCAGAATTTCAGACTGGTCGAGTGAAGAAAATCATGAAGCTTGATCCCGAAGTCCAGAGGATAAGTTCAGAAGCCTTGTTCCTGGTATCATGCTCCACCGAGCTCTTCCTCCGACTCCTGGCTGAAAAGTCTGCCCAAGTTGCAATCGAGAAGAAGCGTAAGACTGTGAAGCTTGAACACTTAAGAATCGGTGTCAAGAGACACCAACCAACCAGCGATTTTCTGCTTGATTCGCTTCCTCTGCCCTCTCGGCACGTTGATCGCCCCACCAAAGATCGGAGCCAATCTGGCCCTGATGCTGATAAGCTTCCTCCGCCAGGTACTCGCCGTATCGATCATTTCTTCCGAAAGCCAGAAGAAGAAGCACCAGAACCGAGAGATGGGTCTTAG 423 0.5035 MAEEEKDSSMRPEFQTGRVKKIMKLDPEVQRISSEALFLVSCSTELFLRLLAEKSAQVAIEKKRKTVKLEHLRIGVKRHQPTSDFLLDSLPLPSRHVDRPTKDRSQSGPDADKLPPPGTRRIDHFFRKPEEEAPEPRDGS 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0748 140 Gene3D Histone, subunit A 1 91 IPR009072 GO:0046982
Lele23g0748 140 MobiDBLite consensus disorder prediction 95 109 - -
Lele23g0748 140 SUPERFAMILY Histone-fold 7 91 IPR009072 GO:0046982
Lele23g0748 140 MobiDBLite consensus disorder prediction 116 140 - -
Lele23g0748 140 MobiDBLite consensus disorder prediction 83 140 - -
Lele23g0748 140 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 13 74 IPR003958 -
Lele23g0748 140 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 4 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0748 Lele-ChrLele23 6165372 6165794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0748 4 128 CCAAT-HAP5 Transcription Factor Family AT5G43250 64.800 1.68e-47 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Lele23g0748 CBFD_NFYB_HMF 1.6e-17 CL0012