Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0705 ATGGACAATGGTTTCTCTTCTCCTCGACGCGATGCTTTTCCAGCTGGTCTGCGAGTTCTCGTCGTTGATGATGACCCAACATGGATCAGGATCCTTGAAAAGATGCTCAAGAAGTGCTCCTATGATGATAAAGCTGCAGTGATGTCGGTAGATGGAGAAACAAGCAGGGTGATGAAAGGTGTTCAACATGGAGCATGTGATTATCTCCTTAAGCCGATTCGAATGAAAGAACTGCGAAACATATGGCAACATGTGTTCAGAAAGAGGATTCATGAGGCAAGAGAATTTGAAGGCCATGAAGGATTTGAGGGCCTTCATTTAATGAGAAATGGATCAGATCAGTCTGAAGATGGGATGTCGTTTGCCTTTGAAGATATGACTTCCATGAAGAAAAGAAAAGACCTTGATAACAAACATGATGACAAAGAATTCGGAGATCCATCTTCCACCAAGAAAGCTAGAGTAGTACGTGTCTTGAAATACCGGCTCTACTTGAGTAGGTTGCTGAAAGAAAATGATCAGAGATCTTCCTCAAGTGGGACGAAGCCTTCAGAGTTTCCTCCAAAAGACTCTGCAGGAAGTTTTGGATTATTCCAGAACTCAACAAACAGGCAGCAAAATGATGTTGCAGTTGATGGCTACAAATATTCAGATGTAACATTACAGAGTCATGCCTCTGAGACCAAGATTCACTGCGACAGCGATCTCAAGGCAATTGTTTCGGAGTCCACAGCAGAAAAAAGTAGAGCTTTGTCTGGTGGAAGCATTCCTGATACAAAGGTAAGTTCCCAGATAAGTCTTAACCATTCTTCTTTTGGACCTCTTGAGTCAGAAGGAAGAAGGCATGCAGTATTCAATTGCACCATCCCATCAACACAGTACACCTGGAGTGAAACTCCAGAAATTCCACTCAAGAAAGAACAGAAGTCATTTCTTCAATTAGAAGACAGCTTCAGTCAGTTACCTTTACACGTCACGCAGAACCCGATTCAGGTGGACCAATCACATTCAATTGCTTCAGTTAGTTCCAACCCTTCTATAACAGAAGGAGAGATTGTTGCCTCTATTGAAACTAAGCCGATGTATGTTGATTACAAAAGTGATTATGCCAGTCCTGTGAGTTCAATAGAGAGTGTAGTGGACACATTTCCTACTCAGTCCAAGAGCCTTATAGAGAATGGTCAACTTTCAGACCCTTCAACTAAGAATTTGGACATGAAAACTCAGGGATTCAATCTAGGTAATTCTGACCCAGAATTTTACCCTGAGAACTTAATTTTTGAAGGCAAGGTGGATTCGTTACCATTGGACGAGGGCCTGCAATTCTATTATTGGCTGCAATGTGAAGGCTATAATATGAACTGGGGATTGGAGAATATAGGAATGCCAGAGTATTATGATGATCCAGGTCTTGTTGCAGAACTTTCCAGTCACCTATATGATTCAGCAGATTATACTCTTGTAGATCAAGGCTATTCATAG 1482 0.417 MDNGFSSPRRDAFPAGLRVLVVDDDPTWIRILEKMLKKCSYDDKAAVMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKRIHEAREFEGHEGFEGLHLMRNGSDQSEDGMSFAFEDMTSMKKRKDLDNKHDDKEFGDPSSTKKARVVRVLKYRLYLSRLLKENDQRSSSSGTKPSEFPPKDSAGSFGLFQNSTNRQQNDVAVDGYKYSDVTLQSHASETKIHCDSDLKAIVSESTAEKSRALSGGSIPDTKVSSQISLNHSSFGPLESEGRRHAVFNCTIPSTQYTWSETPEIPLKKEQKSFLQLEDSFSQLPLHVTQNPIQVDQSHSIASVSSNPSITEGEIVASIETKPMYVDYKSDYASPVSSIESVVDTFPTQSKSLIENGQLSDPSTKNLDMKTQGFNLGNSDPEFYPENLIFEGKVDSLPLDEGLQFYYWLQCEGYNMNWGLENIGMPEYYDDPGLVAELSSHLYDSADYTLVDQGYS 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0705 493 MobiDBLite consensus disorder prediction 172 199 - -
Lele23g0705 493 ProSiteProfiles Response regulatory domain profile. 1 86 IPR001789 GO:0000160
Lele23g0705 493 PANTHER TWO-COMPONENT RESPONSE REGULATOR 47 158 IPR045279 GO:0009736
Lele23g0705 493 Gene3D - 42 116 - -
Lele23g0705 493 SUPERFAMILY CheY-like 16 94 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0705 Lele-ChrLele23 5530291 5534391 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0705 32 458 Response Regulator Gene Family AT1G67710 29.072 5.40e-28 114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0705 23 5530291 5534391 Lele23g0705 23 5530291 5534391 ECH
Lele21g1322 21 21595188 21599250 Lele23g0705 23 5530291 5534391 hybridization
Lele22g1319 22 18891546 18895939 Lele23g0705 23 5530291 5534391 hybridization