Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0689 ATGGCTATTGATATGGAACTTCCATTGTTGTTTACATCTCTCCTCCTACTTCTCGCTCCTTCCTTCATTTTCTCTTCCCCACTTGAAGATCCTGAATTGGTAGTCGAACAAGTATACAAGAGCATCAATGCGTCGAGAAGAAACTTGGGGTTTCTGTCTTGTGGAACAGGGAACCCCATTGATGATTGTTGGAGGTGTGATCCCAACTGGCATAAGAACAGAAAGCGTCTAGCTGATTGCGGCATTGGCTTCGGCAAGAACGCCATCGGAGGCAGAGACGGCAGATACTACGTCGTCACCGACCCCGATGACCACCCTGTGAATCCCAAGCCAGGAACTCTCAGATACGGCGTTATACAGAAACAACCATTGTGGATCGTCTTCAAGAGGGACATGGTGATCAAGCTCAAACAAGAACTTATCATGAACTCCTTCAAGACCATCGATGGCAGAGGAGCCAATATTCACATCTCTGGTGGGCTAGTCCAGAGAATGCCAAGATGCAGACATGGATACTTCCATGTGGTGAACAATGACTACACTCAGTGGCAGATGTATGCAATAGGAGGGAGTGCTAATCCAACTATAAACAGTCAAGGAAACAGATTTCTTGCCCCTAATGACGGTACCTTCAAAGAGGTGACCAAGAGGGAGTATACGCCGGAGAGTGTATGGAAGAACTGGAACTGGAGGTCTTCAGGGGATCTGATGCTAAACGGTGCGTTTTTCACGGCGTCAGGGAAGGGAGCGTCTTCGAGCTATGCTAGAGCTTCGAGTCTGTCTGCAAAATCATCATCTTTGGTTACTTCTATGACAGCTTCATCTGGAGCACTTAAATGTACAAGGGGATCGCGTTGCTGA 861 0.475 MAIDMELPLLFTSLLLLLAPSFIFSSPLEDPELVVEQVYKSINASRRNLGFLSCGTGNPIDDCWRCDPNWHKNRKRLADCGIGFGKNAIGGRDGRYYVVTDPDDHPVNPKPGTLRYGVIQKQPLWIVFKRDMVIKLKQELIMNSFKTIDGRGANIHISGGLVQRMPRCRHGYFHVVNNDYTQWQMYAIGGSANPTINSQGNRFLAPNDGTFKEVTKREYTPESVWKNWNWRSSGDLMLNGAFFTASGKGASSSYARASSLSAKSSSLVTSMTASSGALKCTRGSRC 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0689 286 PANTHER PECTATE LYASE 18-RELATED 35 160 IPR045032 GO:0030570
Lele23g0689 286 SUPERFAMILY Pectin lyase-like 78 286 IPR011050 -
Lele23g0689 286 SMART amb_all 32 209 IPR002022 -
Lele23g0689 286 Gene3D - 57 160 IPR012334 -
Lele23g0689 286 Gene3D - 161 279 IPR012334 -
Lele23g0689 286 PRINTS Pollen allergen Amb family signature 80 97 IPR018082 -
Lele23g0689 286 PRINTS Pollen allergen Amb family signature 139 155 IPR018082 -
Lele23g0689 286 PRINTS Pollen allergen Amb family signature 103 128 IPR018082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0689 Lele-ChrLele23 5351193 5353936 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0689 156 286 Polysaccharide Lyase AT4G24780 77.863 1.86e-59 193