Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0679 ATGGAGAAAAAAGGTGGGTTTCTTCGTTATGCAGATAGGGTTGATAAGTTACTGTTATCGTTTGGGACATTGGGTTGCATTGGAGATGGCCTTCAAACTTCTGTCACAATGCTTGTTCTTGGCAGTTTGATCGATGACTATGCAAATCATACGTCTGATTCTCAGAATGATGCCTTCAAGCATTCTGTAGACAAGTACGCTCTCAGGCTGCTCTATATTGCCATTGGAGTGGGCTTATCTGCATTTATTGAAGGAGTATGTTGGACAAGAACTGCAGAAAGACAAACATCTCGCATGAGAATTGCATATCTCAAATCAATCATTAGGCAAGAAGTTGGTTTCTTTGATAGCCAATCAGGCTCTTCCACCACCTTCCAAGTTATTGCCACCATATCTTCTGATGCTCAAACCATTCAAGACACCTTGTCTGAAAAGATACCCTCTTGTTTGGTTCACCTTTCAGCAGTGTTCTCAAGCTTCATAGTAGCTTCAATTCTGTCATGGAGATTAGCAGTATCTGCATTTCCATTTTCAATTATGATGATAATGCCAGCAATCATATTTGGGAAGAAACTAAAAGAGCTAGGAAGTCAGATGAAGGATGCTTATGGTGTTGCAGGTGGCATAGCAGAGCAAGCAATCTCATCGATTTGCACGGTATATTCATATGTAGGAGAGAAACAAACACTAGAGAGGTTTGGCTCAGCTCTTGAAACAAGCATGAAGGTTGGCATTAAGCTTGGTTCAACCAAAGGTGTGGTGATTGGAAGCTTTGGATTGATCTATGCAACATGGGCATTCCAAACATGGGTTGGAAGCATTTTGGTCTCTCAAAGAGGAGAAAGTGGTGGAAAAGTTTTTGTTGCTGAAATCTGTATCATCTGGGGAGGATTGTCATTGATGAGTGCACTTCCAGGAAATGAAGCAGCTTCAATGGAAGATGTTGAAAATGCAGCAAGGGCTGCCAATGCACATGATTTCATTGTCAAACTTGTTGATGGATATGAAACTCAAGTGGGGCAACTAGGAACCCAATTGTCTGGAGGGCAAAGGCAAAGGATTGCCATAGCAAGGGCTCTGATAAGAAACCCTAAAATCTTGCTACTTGATGAAGCTACCAGTGCTCTTGATTCACAGTCTGAAAAATTAGTACAAGAAGCCCTGGATTTAGCTTCCCAAGGAAGAACCACAATCATCGTGGCCCATCGCCTTTCAACGATTCGTAAGGCTGACTTGATAGTAGTTCTTCAATCAGGAAAAGTCATTGAATCAGGTTCCCATGATGAACTTATCCAAATCAACAATGGACAAGGTGGAACATACAGCAAACTGCTTCAATTGCAACAATCAGCCCTTGAAAACAAAGAGGAATCCATTTACTACACAAACACAAGTCCACTAAATGTAGAAGCTCCAAGAACATCATATTCAAGTTGGCAAAGTAGCCCGGCTATGCCATTTAGCCCTATTTATTCTTTCAGCATTGCAGATTCTCCCCTCGATGATTACTTCGATAACAAGAAATCTTCTGATTCAGATCAAAGTTTCTCGCAATGGCGCTTGATCCGCATGAATGCACCTGAATGGAGGCAAGCTTTGCTTGGGTGTTTAGGAGCTATGGGATCTGGAATATGCCAACCAATATACTCATATTGCTTGGGAATTGTTGCATCTGTTTACTTCATAAAAGACAAACATCGAATCAAATCCGAAATCAGGTTGTACTCGATCATCTTTTGCACTCTAGCGATTGTGAACATCATTTCAAGTCTCATTCAGCAGTACAATTTCTCTGTCATGGGAGAGAGATTGTTGAAAAGAGTAAGAGAAAACTTGCTGGCTAAAGTTTTGACCTTTGAGATTGGATGGTTTGACCATGAAGATAACACTAGTGCAGCAATTTGTACACGGCTAGCGAATGAAGCTAACTTGGTTCGATCGCTCATTGCAGAAAGAATGTCATTGTTGATTCAAGTTTTCTTTATGGCATCTCTGGCTTTTATACTTGGCTTAGTTGTTTCATGGAGGGTGGCTATTGTGATGATTGCAATGCAGCCTTTGATCATTGCTTGTTTCTATTCAAAAAGTGTTTTGAGGAAAAATATGTCTGTCAAAGCTCAAAAGGCTCAGAAAGAGGGAAGTCAATTAGCAATGGAAGCTACCATAAACCATAGAACTGTTGTAGCATTCTCATCAGAGAGAAGGATTCTGAATCTGTTTAAGATTGCCATGAAAGGACCTCACAAAGAAAGCATCAAGCAATCGTGGATTTCGGGTTCGATCATGTCAATTTCTCAGTTCTTGACAACTGCTTCTATAACTATCACTTTTTGGTATGGAGGGAGGCTTTTGAATCAAGGGTTGGTGGAATCAAAGAACCTTTTGCAGGTTTTTCTGATCTTGATGGGAACTGGAAGACAAATTGCAGAAACGGCAAGTATGACTTCTGATATAGCCAAAAGTGGGAGAGCCATTGGTTCAATTTTTGCCATTTTGGACAGGAAAACTCAGATTGAACCTGAAGATGAAGAAGAAGATGATGACCATACGCATAAGAAGTCTAAAAAGAAGCCAATTAAGGGCAACATAAAGTTGCAGAATGTGTTCTTTGCTTACCCAACAAGGCCTAATCAAATGATACTCAAGGGTCTAGGTCTTGAGATTGAATCTGGGAAAACAATAGCACTTGTGGGACAAAGTGGCTCAGGGAAATCCACTATTATTGGATTAATTGAAAGGTTTTATGACCCTGTGAAAGGATCACTATCTATAGATAACTGTGACATTAAGGAATACAATCTGAGAAAGTTGAGATCACAGATTGCCTTGGTGAGTCAGGAGCCTACTCTATTCGCAGGAACTATACGCGACAACATCGTTTACGGGACAAAGGAAGCATCAGAGGAAGAAACCAGAAGGGCGGCTCATCTTGCAAATGCTCATGAGTTCATAAGTTCAATGAAAGATGGATATGATACAAATTGTGGAGAAAGAGGAGTGCAGCTATCAAGAGGACAAAAGCAAAGGATAGCAATAGCGAGAGCAATCCTGAAGAAGCCATCAATCTTGCTGTTAGATGAAGCAACAAGTGCTCTTGATAGTGTATCAGAGAATGTGGTGCAGGAAGCACTGGAGAAGATGATGGCGAGAAGAACATGTGTAGTTATAGCTCATAGATTGTCCACAATACAGAGTGTAGATTCCATAGCTGTGATTAAGGATGGCAAGTTACAAGAATTAGGATCTCACTCTGAGTTATTGGCCATAGGACCAAAAGGGGCGTACTACTCCATGCTTAAGTTGCAGCAGAGTCACTCTACCTAA 3324 0.4088 MEKKGGFLRYADRVDKLLLSFGTLGCIGDGLQTSVTMLVLGSLIDDYANHTSDSQNDAFKHSVDKYALRLLYIAIGVGLSAFIEGVCWTRTAERQTSRMRIAYLKSIIRQEVGFFDSQSGSSTTFQVIATISSDAQTIQDTLSEKIPSCLVHLSAVFSSFIVASILSWRLAVSAFPFSIMMIMPAIIFGKKLKELGSQMKDAYGVAGGIAEQAISSICTVYSYVGEKQTLERFGSALETSMKVGIKLGSTKGVVIGSFGLIYATWAFQTWVGSILVSQRGESGGKVFVAEICIIWGGLSLMSALPGNEAASMEDVENAARAANAHDFIVKLVDGYETQVGQLGTQLSGGQRQRIAIARALIRNPKILLLDEATSALDSQSEKLVQEALDLASQGRTTIIVAHRLSTIRKADLIVVLQSGKVIESGSHDELIQINNGQGGTYSKLLQLQQSALENKEESIYYTNTSPLNVEAPRTSYSSWQSSPAMPFSPIYSFSIADSPLDDYFDNKKSSDSDQSFSQWRLIRMNAPEWRQALLGCLGAMGSGICQPIYSYCLGIVASVYFIKDKHRIKSEIRLYSIIFCTLAIVNIISSLIQQYNFSVMGERLLKRVRENLLAKVLTFEIGWFDHEDNTSAAICTRLANEANLVRSLIAERMSLLIQVFFMASLAFILGLVVSWRVAIVMIAMQPLIIACFYSKSVLRKNMSVKAQKAQKEGSQLAMEATINHRTVVAFSSERRILNLFKIAMKGPHKESIKQSWISGSIMSISQFLTTASITITFWYGGRLLNQGLVESKNLLQVFLILMGTGRQIAETASMTSDIAKSGRAIGSIFAILDRKTQIEPEDEEEDDDHTHKKSKKKPIKGNIKLQNVFFAYPTRPNQMILKGLGLEIESGKTIALVGQSGSGKSTIIGLIERFYDPVKGSLSIDNCDIKEYNLRKLRSQIALVSQEPTLFAGTIRDNIVYGTKEASEEETRRAAHLANAHEFISSMKDGYDTNCGERGVQLSRGQKQRIAIARAILKKPSILLLDEATSALDSVSENVVQEALEKMMARRTCVVIAHRLSTIQSVDSIAVIKDGKLQELGSHSELLAIGPKGAYYSMLKLQQSHST 1107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0679 1107 Gene3D ABC transporter type 1, transmembrane domain 8 305 IPR036640 GO:0005524|GO:0016020
Lele23g0679 1107 Gene3D ABC transporter type 1, transmembrane domain 450 465 IPR036640 GO:0005524|GO:0016020
Lele23g0679 1107 Gene3D ABC transporter type 1, transmembrane domain 512 824 IPR036640 GO:0005524|GO:0016020
Lele23g0679 1107 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 856 1102 IPR027417 -
Lele23g0679 1107 Pfam ABC transporter 324 374 IPR003439 GO:0005524
Lele23g0679 1107 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 21 312 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele23g0679 1107 CDD ABC_6TM_Pgp_ABCB1_D2_like 522 838 - -
Lele23g0679 1107 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 214 443 IPR003439 GO:0005524
Lele23g0679 1107 SUPERFAMILY ABC transporter transmembrane region 7 298 IPR036640 GO:0005524|GO:0016020
Lele23g0679 1107 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 863 1099 IPR003439 GO:0005524
Lele23g0679 1107 MobiDBLite consensus disorder prediction 839 858 - -
Lele23g0679 1107 PANTHER ABC TRANSPORTER B FAMILY 511 1101 - -
Lele23g0679 1107 Gene3D - 306 449 IPR027417 -
Lele23g0679 1107 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 533 820 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele23g0679 1107 FunFam ABC multidrug transporter, putative 316 449 - -
Lele23g0679 1107 SMART AAA_5 269 420 IPR003593 -
Lele23g0679 1107 SMART AAA_5 890 1083 IPR003593 -
Lele23g0679 1107 SUPERFAMILY ABC transporter transmembrane region 519 839 IPR036640 GO:0005524|GO:0016020
Lele23g0679 1107 FunFam ABC transporter B family member 4 853 1106 - -
Lele23g0679 1107 Pfam ABC transporter transmembrane region 534 801 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele23g0679 1107 Pfam ABC transporter transmembrane region 27 285 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele23g0679 1107 ProSitePatterns ABC transporters family signature. 346 360 IPR017871 GO:0005524|GO:0016887
Lele23g0679 1107 Gene3D ABC transporter type 1, transmembrane domain 826 860 IPR036640 GO:0005524|GO:0016020
Lele23g0679 1107 Pfam ABC transporter 881 1030 IPR003439 GO:0005524
Lele23g0679 1107 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 306 448 IPR027417 -
Lele23g0679 1107 CDD ABC_MTABC3_MDL1_MDL2 863 1102 - -
Lele23g0679 1107 CDD ABC_6TM_Pgp_ABCB1_D1_like 19 322 - -
Lele23g0679 1107 Gene3D - 861 1105 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0679 Lele-ChrLele23 5243276 5249459 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0679 7 305 Calmodulin-binding Proteins AT2G36910 28.000 8.58e-37 149