Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0668 ATGTCCAAACCGTGGGGTGGTGCCGGAGCTTGGGCCGCCGAGGCCGAGCGCGCCGAGGTCGAAGAGCGTGAGCAAGCGTCAGCAGCTGCCGCTTCGGGATCCCAGAACTTCCCCAGCCTGAAGGAGGCCGTGAATGCGAAGCCTAAGAAGAAGAAAATGTCTCTGTCGGAGTTTAATAGTATTTCCACTGCCGGCGAACGTGGTATCGCCACCGAGTATAAGGGCCTGACGCAGAATGAGATGCTTCGGCTCCCTACGGGCCCGAAGGATCGTTCTGCGGATGAAATGCCGTATAGTCGTGGGTTCTCCTCTTATGGGCGTTCAGCTCTGCCGCAAGGACGCATGCGAGACCGTGACGACAATGATGGTTCATGGGGTGGAGGAAGAAGATCCTATGGAGGATTTGATGAAGAACGTAGGGGTCCCCCTTCTAGGGTTTCGGATTACGATCAGCCATCCAGGGCAGACGGGGATGATAATTGGAGCGCGGTTAAAAAATATCTTCCATCGTTCGATTCAGGTCGGCAAAATCGCTATGGTTCGCTTGGTGGTGGTTCCAGGGCTGATGAGAAGGATAACTGGTTAGTTGATAAAAAGCCTTTTTCTGCTAGATCTCCCGCATTTGGTTCTGGGTTTCGCGATTCGGGTGTGGAGCCTGACCGCTGGGCAAGGGGGCCACCGCGCGATGAGCGGGAGCGTCCCAGATTGATATTGAATCCGCCAAAAGGTAATGCCCCTGTTAATGAACCAGTCAAGACAAATAAGGCGAATCCATTTGGCGCAGCTAGGCCCAGGGAAGAAGTTTTGGCTGAGAAGGGTGTGGATTGGAAGAAGGTGGACTCTGAAATTGAAGCTAAGAAAACAAGTAGGCCTTCAAGTTCGCACTCTATCAGGCCATCCAGTGCTCAATCCAGTCGTTCTGAGGATACAGGGTCGCAGGAGACAGAAACTATGGTAAAACCCAGACCAAAGGTGAATCCATTTGGGGATGCAAAACCCCGAGAAGTATTGCTGGAGGAGCGAGGTAAAGATTGGCGGAAGATTGATCTCGAATTGGAGCATCGCGGTGTTGACAGGCCAGAAACTGTGGAGGAAAAATTATTGAAAGAAGAAATTGATAATTTGAAGAAGGAGTTTGAGAAAGATTCAACATTAAATTCAAGGAAGGAATCTGTGGAAGAAGCTGGTGGAGACCAAACTAGCCTACAAGAAATTTTACTTCAGAAGGAAAGGGAGCTGGAATCTCTTATTCGTGATTTGGATGACAAAGTTCGTTTCGGGCAAAAAGCTATTGAAAGGCCTGGCTCTGGAGCAGGAAGGCCTGGTTCTGGAGCGGGAAGGCCAGGTTCTGGAGCGGGAAGGCCAGGTTCTGGAGCCGGAAGGGCTGCTGGTTTTCCTGATAGGCCAAATTCTCAGTCTGGCTCATTTGATGATTCTAGGAGTGTGGAATTCACAGACAGACCTCCGTCCCGAGGCACAGGAGATGTGTGGACATGGCCTGATAACAGAAGACCATTTCAAGGTGCCAGGGACAGAGGGTTTCCAAATAACAGGGTCTTGGATAGGTCAAGATCGAGAGAGAGATGGTGA 1590 0.5107 MSKPWGGAGAWAAEAERAEVEEREQASAAAASGSQNFPSLKEAVNAKPKKKKMSLSEFNSISTAGERGIATEYKGLTQNEMLRLPTGPKDRSADEMPYSRGFSSYGRSALPQGRMRDRDDNDGSWGGGRRSYGGFDEERRGPPSRVSDYDQPSRADGDDNWSAVKKYLPSFDSGRQNRYGSLGGGSRADEKDNWLVDKKPFSARSPAFGSGFRDSGVEPDRWARGPPRDERERPRLILNPPKGNAPVNEPVKTNKANPFGAARPREEVLAEKGVDWKKVDSEIEAKKTSRPSSSHSIRPSSAQSSRSEDTGSQETETMVKPRPKVNPFGDAKPREVLLEERGKDWRKIDLELEHRGVDRPETVEEKLLKEEIDNLKKEFEKDSTLNSRKESVEEAGGDQTSLQEILLQKERELESLIRDLDDKVRFGQKAIERPGSGAGRPGSGAGRPGSGAGRPGSGAGRAAGFPDRPNSQSGSFDDSRSVEFTDRPPSRGTGDVWTWPDNRRPFQGARDRGFPNNRVLDRSRSRERW 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0668 529 MobiDBLite consensus disorder prediction 515 529 - -
Lele23g0668 529 MobiDBLite consensus disorder prediction 375 403 - -
Lele23g0668 529 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 528 IPR010433 GO:0003743
Lele23g0668 529 MobiDBLite consensus disorder prediction 265 291 - -
Lele23g0668 529 MobiDBLite consensus disorder prediction 217 237 - -
Lele23g0668 529 MobiDBLite consensus disorder prediction 427 529 - -
Lele23g0668 529 MobiDBLite consensus disorder prediction 132 161 - -
Lele23g0668 529 MobiDBLite consensus disorder prediction 79 335 - -
Lele23g0668 529 MobiDBLite consensus disorder prediction 375 395 - -
Lele23g0668 529 Pfam Plant specific eukaryotic initiation factor 4B 1 453 IPR010433 GO:0003743
Lele23g0668 529 Pfam Plant specific eukaryotic initiation factor 4B 453 513 IPR010433 GO:0003743
Lele23g0668 529 MobiDBLite consensus disorder prediction 292 319 - -
Lele23g0668 529 MobiDBLite consensus disorder prediction 1 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0668 Lele-ChrLele23 5156421 5162154 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0668 1 529 Eukaryotic Initiation Factors Gene Family AT3G26400 50.000 9.97e-135 399
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0668 23 5156421 5162154 Lele23g0668 23 5156421 5162154 ECH
Lele21g1354 21 21999321 22005540 Lele23g0668 23 5156421 5162154 hybridization
Lele22g1348 22 19281581 19286784 Lele23g0668 23 5156421 5162154 hybridization