Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0664 ATGCACGTGCGCAGCATTGAAATCCTGTCCCTAGCCACCACCCTGCTCAATTTGTTCCTACGTTGGCCTCTTCCTGGCCCTCTCTGTTCCATTTCCCTGCTTAGCTACAGAGACACACACACCTTGAAACAGAGACGAAGAAGAAGAACAATCATGGGTCTCTCAAATATCCCTAATTTATCTGAAGGGGTACTTCCTGCGCTTTTGGTTAACACAGTTCTATCAGTGGTTCTCCTCAAGAACATGCTGAGATCTGTGCTGGTAGCCGTTGGCGTGACATCCTCGTCGTCTTCATCGTATTCTCAGAACATGGAGGAAGATTCAGACGAAGAAACAGAGCGAGAGAGTTGGAGAAGAAGGAGGGTGTCAATAACACAGTACAAGGTGTGTAGAGGAACAACATCAACATCAACAACAACAACAACGAGTGACTCTGGTTCGGGTGTCGGAGGATTATCGGGTACGGTGGAGTGCTGCGTATGTTTGTGTGGGTTTGAAGCGAATCAGGAGGTGAGTGAATTGCCCTGCAAGCATTTCTTCCACAGAGCTTGCTTGGACAAGTGGTTCGATAACGAACACTTAACCTGCCCTCTGTGTCGTTCCATAGATTAG 612 0.4788 MHVRSIEILSLATTLLNLFLRWPLPGPLCSISLLSYRDTHTLKQRRRRRTIMGLSNIPNLSEGVLPALLVNTVLSVVLLKNMLRSVLVAVGVTSSSSSSYSQNMEEDSDEETERESWRRRRVSITQYKVCRGTTSTSTTTTTSDSGSGVGGLSGTVECCVCLCGFEANQEVSELPCKHFFHRACLDKWFDNEHLTCPLCRSID 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0664 203 SMART ring_2 158 199 IPR001841 -
Lele23g0664 203 MobiDBLite consensus disorder prediction 96 116 - -
Lele23g0664 203 Pfam Ring finger domain 157 200 IPR001841 -
Lele23g0664 203 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 133 202 IPR013083 -
Lele23g0664 203 SUPERFAMILY RING/U-box 157 201 - -
Lele23g0664 203 SMART ringv_2 157 200 IPR011016 GO:0008270
Lele23g0664 203 ProSiteProfiles Zinc finger RING-type profile. 158 200 IPR001841 -
Lele23g0664 203 PANTHER - 52 201 IPR044249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0664 Lele-ChrLele23 5127890 5128580 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0664 52 201 C3H Transcription Factor Family AT2G04240 33.537 5.80e-21 83.6