Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0657 ATGTTTCCCCGTTCTATCAGACAAACCCTCATCCAAAAATCTGATTCTCCTAACAAACAACGCTTTCCCGTTTCCGTTTTGGGACTTTTCCGCCGCTACTTCTCTGCTAAGAAAGCTGATGGGGGCTCGAGGACGGAGGAAGAAGAAAGAGTTTACTCATGGTTATATGCTTTGGCTCGCTCTGAAAGAAATTTGGCCTTTGAGTACGTTCGTTCCACTGAAAGAGGCTTAAGTTTCGCTGAAGCAGAGAGGAGACTGAAGGAAAATGGACCAAATGTTGTGCATGAGCATGCTTTTCCAAGCTGGTGGCATCTTCTATGGAGTGCACTTTTTCATCCTTTCAATATCATTCTGATTGTCTTGTCAAGCTTGTCCTTCATAACCAGTGACATTCCAAATGGTTGTATCATGCTCACACTTGTTTTTATCAGTGTCTCCCTTCGTTTCTATCAGGAGTACAGCAGCTCAAAAGCAGCCATGAAGCTTTCGGAATTTCTAAGATACCCAATAAAAGTTCAAAGATGTGCAGGCAGAATTGTGCAACAAGAATTAGTAGTTCAAGTTGATCAGAGGGATATAGTTCCTGGTGACATTGTGATTTTTGAACCTGGGGACCTCTTTCCTGGAGATGTTAGATTGTTATCTTCCAAAAATCTTGTTGTAAGCCAGTCCTCACTAACTGGGGAATCTTGGACGACTGATAAAACTGCCGATGTCAGAGAAAGTCTCAGCACTCCTTTGTTAGATTTAAAGAACATTTGTTTCATGGGCACAAACGTGGTATCTGGAAGTGGAACAGGCCTAGTTATATCAACTGGATCTGATACATACATGAACACCATGTTCTCAAAGATTGGGAAGAAGAAGCCACCAGATGAATTCGAATATGGTCTACGTTGGATATTTTATGTGCTCGTGGCTATTATGCTAGTGGTAGTAACAGTCATATTTGTAACAGATTACTCTACTTCTGATGATTTGAGCAAAAGTATTATTTTTGCCATCTCTGTGGCATCTGCCCTCACTCCTCAAATGCTTCCTCTCATCATCAACACTTGCCTTGCAAAGGGAGCGCTAGCCATGGCTCGAGACCGATGTATAGTCAAAAGTTTAGCATCAATACGCAACATGGGATCGATGGATATCCTTTGTATTGACAAGACAGGTACACTGACAATGAACCGTGCAATTATGGTAAATCATCTTGACTGCCATGGGATAACGCAAGAGAAAGTTCTACGCTTTGCGTTCCTCAATTCTTACTTCAAGACAGATCAGAAGTATCCTCTGGATGATGCCATATTGGCTTTTGTATATTCAAATGGATTCAGATTTCATCCCTCAAAATGGACGAAAATAGATGAGATTCCTTTTGATTTCATACGTAGAAGAGTATCTGTCATCATAGAAACAGAGTCGCATATTGAAGACAGGCAGTCTCAGTTATTTGGCAGGTTCATGGTAACTAAAGGGGCATTGGAGGAAGTAATGAGAGTTTGTTCTTTCATTGAGAATTTCAATAACAATGAAGTTTCCAAGTTCTCTGCAGATGATTATAACAGAATTTTAGCCTTGGCCGAAGGATTGAGCAATGAAGGGTTAAGAATTATAGGAGTAGCTATAAAGAAGCTAGAAATGCAAAACAGCGAAACAAGCACCGGAAGAAGTAAGAGCATTGAAGAAAATGTTGAGACAGACATGGTGTTTCTTGGTGTCATAACATTCTATGACCCTCCCAAGGACTCAGCAGAACAAGCGCTGTGGCGCTTAGCAGAGAAAGGAGTCAAAGCAAAAGTTTTGACGGGTGATTCACTTTCCTTAGCCATGAGGGTATGCAGAGAAGTAGGCATCAGAACTATCCATGTAATCACAGGGCCTGAGCTCGACCGATTAGACCAAGAAACTTTTCATGAAACTGTCAAAAGAGCAACAGTACTAGCTAGGCTTACTCCAATTCAGAAACTGCGTGTAGTCCAATCCTTACAGACAATGGGAAACCATGTTGTCGGGTTCTTGGGAGATGGCATTAACGATTCACTTGCCCTTGATGCTGCCAATGTAAGCATTTCAGTGGACTCAGGCGTAGCAATTGCCAAAGACATGGCAGACATTATACTGCTTGAGAAAGATCTTAATGTTCTTGTGGCAGGAGTAGAACATGGTAGACTCACTTTTGGAAACACAATGAAGTACATTAAAACATCGGTTGTCGCTAACTTAGGAAGCGTGCTTTCGCTGCTCATAGCGACCTTGGCGCTTAAATTCGAGCCCGTGACTTCAAGACAGCTTCTTACTCAGAATTTCCTGTATAGTGTAGGACAAATCGCTATTCCATGGGACAAAATGGAGGAAGATTATGTGAAGACTCCTAAGAAATGGTCAGAGAGAGGATTACCTATGTTCATATTGTGGAATAATCCTGTGTGCACTCTTTGTGATGTTGGGGCTCTTTTGTTTATTTGGTACTATTACAAGGCTTATGGGGATCAAAAGTTTTGCCATTCGGCTTGGTTCGTTGAGGGGTTGATGATGCAGACTCTGATTATCCACTTCATAAGAACTGAGAAAATTCCATTTATGCAAGACGTAGCTTCATGGCCTGTGATTTGTTCCACTGTTGTTATTTCCTGTATTGGAATCGCACTTCCATTCACACCCATTGGAGAAGTCATGGGACTCACTAGTCTACCCCTCTCGTATTTTGGGTTTTTGGTGGTTCTTTTTCTGGTTTATTTCACAATTGGCCAAGTGGTCAAGAGACTTTACATATTTGTTTATAAAAGATGGCTTTGA 2793 0.4146 MFPRSIRQTLIQKSDSPNKQRFPVSVLGLFRRYFSAKKADGGSRTEEEERVYSWLYALARSERNLAFEYVRSTERGLSFAEAERRLKENGPNVVHEHAFPSWWHLLWSALFHPFNIILIVLSSLSFITSDIPNGCIMLTLVFISVSLRFYQEYSSSKAAMKLSEFLRYPIKVQRCAGRIVQQELVVQVDQRDIVPGDIVIFEPGDLFPGDVRLLSSKNLVVSQSSLTGESWTTDKTADVRESLSTPLLDLKNICFMGTNVVSGSGTGLVISTGSDTYMNTMFSKIGKKKPPDEFEYGLRWIFYVLVAIMLVVVTVIFVTDYSTSDDLSKSIIFAISVASALTPQMLPLIINTCLAKGALAMARDRCIVKSLASIRNMGSMDILCIDKTGTLTMNRAIMVNHLDCHGITQEKVLRFAFLNSYFKTDQKYPLDDAILAFVYSNGFRFHPSKWTKIDEIPFDFIRRRVSVIIETESHIEDRQSQLFGRFMVTKGALEEVMRVCSFIENFNNNEVSKFSADDYNRILALAEGLSNEGLRIIGVAIKKLEMQNSETSTGRSKSIEENVETDMVFLGVITFYDPPKDSAEQALWRLAEKGVKAKVLTGDSLSLAMRVCREVGIRTIHVITGPELDRLDQETFHETVKRATVLARLTPIQKLRVVQSLQTMGNHVVGFLGDGINDSLALDAANVSISVDSGVAIAKDMADIILLEKDLNVLVAGVEHGRLTFGNTMKYIKTSVVANLGSVLSLLIATLALKFEPVTSRQLLTQNFLYSVGQIAIPWDKMEEDYVKTPKKWSERGLPMFILWNNPVCTLCDVGALLFIWYYYKAYGDQKFCHSAWFVEGLMMQTLIIHFIRTEKIPFMQDVASWPVICSTVVISCIGIALPFTPIGEVMGLTSLPLSYFGFLVVLFLVYFTIGQVVKRLYIFVYKRWL 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0657 930 SUPERFAMILY Calcium ATPase, transduction domain A 180 283 IPR008250 -
Lele23g0657 930 SUPERFAMILY HAD-like 563 720 IPR036412 -
Lele23g0657 930 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 137 426 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele23g0657 930 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 633 751 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele23g0657 930 Pfam Cation transporting ATPase, C-terminus 756 921 IPR006068 -
Lele23g0657 930 Gene3D - 168 272 - -
Lele23g0657 930 PANTHER CATION TRANSPORTING ATPASE 63 921 - -
Lele23g0657 930 Pfam E1-E2 ATPase 181 363 - -
Lele23g0657 930 SMART Cation_ATPase_N_a_2 57 130 IPR004014 -
Lele23g0657 930 SFLD p-type atpase 366 722 IPR044492 -
Lele23g0657 930 Gene3D - 132 880 - -
Lele23g0657 930 SUPERFAMILY Calcium ATPase, transmembrane domain M 72 927 IPR023298 -
Lele23g0657 930 PRINTS Magnesium-transporting ATPase signature 833 854 IPR006415 GO:0015444|GO:0015693|GO:0016020
Lele23g0657 930 PRINTS Magnesium-transporting ATPase signature 730 745 IPR006415 GO:0015444|GO:0015693|GO:0016020
Lele23g0657 930 PRINTS Magnesium-transporting ATPase signature 883 904 IPR006415 GO:0015444|GO:0015693|GO:0016020
Lele23g0657 930 PRINTS Magnesium-transporting ATPase signature 780 793 IPR006415 GO:0015444|GO:0015693|GO:0016020
Lele23g0657 930 PRINTS Magnesium-transporting ATPase signature 418 431 IPR006415 GO:0015444|GO:0015693|GO:0016020
Lele23g0657 930 PRINTS Magnesium-transporting ATPase signature 297 313 IPR006415 GO:0015444|GO:0015693|GO:0016020
Lele23g0657 930 PRINTS Magnesium-transporting ATPase signature 800 816 IPR006415 GO:0015444|GO:0015693|GO:0016020
Lele23g0657 930 Pfam haloacid dehalogenase-like hydrolase 380 686 - -
Lele23g0657 930 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 378 579 IPR023299 GO:0000166
Lele23g0657 930 ProSitePatterns E1-E2 ATPases phosphorylation site. 386 392 IPR018303 -
Lele23g0657 930 Gene3D - 396 576 IPR023299 GO:0000166
Lele23g0657 930 Gene3D - 381 709 IPR023214 -
Lele23g0657 930 SFLD Haloacid Dehalogenase 366 722 - -
Lele23g0657 930 Pfam Cation transporter/ATPase, N-terminus 70 125 IPR004014 -
Lele23g0657 930 TIGRFAM ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 59 929 IPR006415 GO:0015444|GO:0015693|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0657 Lele-ChrLele23 5066254 5070476 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0657 53 827 Primary Pumps ATPases(2) AT1G07810 25.084 5.57e-56 208