Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0642 ATGATCTCAATCGTGTCAAAGGTTGTAGAATATATGGTGTCTCCAATTTCACAAGGAGCTGGTTATATATTCTGCTTCAACCAATTCATTGGAAATGTTGAGCAAGCAAAGCAAGAGCTGGAGGTGAAACTAGCAGATGTGAAGAAACGCAAGGATGAAGCTGATCGAAAAACTGAAGAAATAATGCCCTCCGTGAAGAGATGGTTAGATGACGTGAATGCAATCTTAGACGAGGTGCAAAAGCTGCAACAAGAGCTTCAAGGAGTAGGAAACAAGTGTTTCAATGTGTCACTCAGATATTCTTTAGCCAAACAAATGGAAAATAAGGCTAAGCAGATGATGGACCTCAAAAACAATTCCAACTTTGAGCCATTTTCTCTTCCCACCCCACTTCCTAGCATCGTTACTCACTTCTCTTCTAAAGACTTTATGGATTTTGACTCAAGGAAATCGACTTATAATCGTCTTTTGGAGGCAATTAAAGATGGCAAGAACAAGATCGTAGGACTGTATGGTATGGCGGGCTCAGGAAAAACCACTTTGGCAAAGGAAGTGGGCAAGAAAGTGGATGGGCTAAAGCTTTTTGACAAGGTCGTCATGGCAGTCATTTCAAAAACCCCAAATGTTTTCAACATTCAGCAGGAAATAGCAGAGCAAGTAGGCTTGGAATTTCATCAAGAGACAACTCAATTTACTAGAGCACAGAGACTATCTTCTGGATTAAAAAGTAAGAGGGTTCTTATAATCTTGGATGATTTGTGGAGCAAACTATGCCTTGAACAAATTGGCATTCCAATAAAGGAAGGTTGTTGTGTCTTGTTAACCACTCGCCTTCATGATGTATGTGTCTCGATGGATTGTGAGAGTATAATTCAATTGCATCTCTTAACTGAGGAAGAGGCATGGGCTTTGTTCAAGATGCGTACTGAAACAACCAATGTCTCAATGAATGAGTTCGACAGCATTGGAAAGGAGATTGTAAATGGGTGTAAGGGTTTGCTTATAGCAATTGTGACAGTTGCAAGCACATTAAAAGGAAAGAGCATTCAAGTGTGGAGGTCAACACTACGAAGGCTACAACATCCCCCACCATTAGATATCGAAGACGATTTGAAGACCCCTTATGCAATTCTCGAAGTAAGTTATGATAATTTGCCAAGTGCACTAGCCAAGTCGCTCTTCTTATTATGCTCTATATTTCCTGAGGATCATGAAATCCATATAGAGGATTTAATTCGTTTTGGCAAAGGGACTCTTAAGCTAGGTGACAATATGTATACAATGGAGGAGGCAAGGAATGAGATTTTAGTAACTACTCAGAAATTGTTAGATTCTTGTTTGTTGATGCGTGCCAATATGCATGCATGCGTAAAATTGCATGATGTGGTTCGGGATGTAGCCTTGTGGATTGGAAAGAAAAGATGTCAAGAAGTTTTGGTGGACAGCAATGCGGTTTCAAACATGTTGGTTAGCAACCATCAGATTTTGAAAGATACAAAGGCACTGTCATTGTGGAATGTGGATAAGAATTTCAAGCTTTCTAATCAATTGGGTTGTCCAACACTTGAGATTCTGCTGCTTCAACCTCATGGGTCCGTTGAAGATCTTCGAGCAATAGAAGCACTTAAAGTCTTGGCACTCATAACATATGGATTTGGCTGGAGGATCTTGGGTTTCTGGTTGAAGAGGTATGCTATCTGTGATCCCACAATTGTTTCTAAATACAAGCTTCCTTTTGTAAAATATTTGGATGGTTGTGACGAAGGATTGAGATATTTATGTATACAAGGCTTCAAAGTCTCTGCTCTAAGTCTATCAATGAAAGATCTTATTCTTAGAGCAAACTGCCTTTGGCTAGAGAATTGTTGGTGTGAACATAAAGATATAAATTTTGAGATAAAGCACTTGGGGGTTTCATGCTGTCAAGAGAAAAGATTCATCATTGATAACCTTGATGATGTGAATGATCTTCAAACACAACAAGTCTTCTCGCACCTCATTACGTTAACATTGATTAAAATGAATAGTCTTGAACAAGTGTTCCAAGATTCATCTATTAGCCACTCTCTCTGCGAGTTACAAGAGCTACGCATACAGAGTTGTCCCGAATTGAGAACTTGTATCTTCACCCATGCCACGGTTAAGAGCCTACCAAAGTTGAGGAAGCTTGAGATTGTGCATTGCAACAAAGTGAAATGGCTATTCTCTTATTCTCTGGCTTTTCACTGTCCTTCACTAGAGGAATTGGAAATAAGAAGATGCTCTGAATTTGAGAGGCTTATTGATGACGAAGCTGCACATGATGAGGACCCACTAGTTCATGATATACAAGATTGTCCATACGGAAATGAGACTGACAGAGCTTATGTGGGGATTACTTTAAAAAGTTTCAACCAGTTGCAAAATCAGCAACCCTTGTTCCTTTTCCTAAGATTGAAATCTCTAAAAATTAAAAGCAGTGGAAGCAAGAAAAGTATTTTTGAGATCCAAGTCAGCAAAACAATAGAAGATGAAGAATCTATTAAGGCACAAGAACCCTTGAAACTGAATTCAGAATTGCGTACATTACGCTTAGAAGGTCTACCTGAGTTGGAATATATTTGCAAGGGCCCCACGCAAATTGTAAGCTTCCATAGGCTCGAACATGTTACATTGTGGAGATGCCGAAGATTGAAAAATATCTTTACTCTAATTATCGTTGCAAGCCTTCCAGAGATGAGGACACTTCAAGTAATTGCATGCGAGGAATGGGAGGGAATATTTTGTGAAGAATCACTCAAAAACCTTTCTTCTTCGTCTTCTTCTAATGTTTGCTTCCCCAAACTTATGCGTATTAGAATATCAGATAGCCACAAAGTGAGAAGGATGTTCTCATATTCTCTAGCATCTCAGTGTCATTCACTAGAGTATCTAACTATAAACGATTGCTCTCAACTTGAGAGGATCGTTGATAAAGAAGCTGCACATAGTGGGGAACGATTACTGCACCAAAGGGAGTCACTTCATGATATGCAAGATTATCCACGTGGAAATGAGACTGACAGAGCTTATGTGGAGGTTACTTTAAAAAGCTTCAACCAGTTACAAAATCAGCAACCCTTGATCATTTTTCTAAGATTGAAATCTCTAGAAATTATAAGCAGTGGAAGAAAGAAAGGTATTCTTGAGGTCCAAGTCAGAAAAATAATAGAAGATGAAAAATCTCTTAAGGCACCAGAACCCTTGAAACTGAAGTCAGAATTGCGTACATTACGCTTAGAAGGTCTACCTGAGTTGGAATATATTTGCAAGGGCCCCACGCAAATTGTGAGCCTCCATAGGCTCGAAGATGTTGCATTGCGGAGATGCCCAAGATTGAAAAATATCTTCACTCTAGCTATCGTTGCAAGCCTTCCGGAGATGAGGACACTCGAAGTAACTAAATGCGAGGAATGGGAGGGAATATTTTGTGAAGAATCACTCAAAAGCCTTTCTTCTTCGTCTTCTTCTAATGTTTGCTTCCCCAAACTTAGGAATATTATAATATCAGATTGCCACAAAGTGAGAAGGGTGTTCTCATATTCTCTAGCATCTCATTGTCCTTCATTGAAAGAAATCCATATAAGAGATTGCTCTCAACTTGAGGGGGTGGTTCAAGCTTATGAAGGTGAAGTAGCCGGTTATGATGAAAGGCTGTTTACTAAACTGTCTGTGTTGGATCTCAAAAGATTGCCAAAGCTGAGTGAGATTTACCCAAGTTATGAATTCAACCTTTCCGACAACAAACTGAACACTCCCAGGAAAAGCAGTATGGGCGGTCGCGGCAAGTCTCGCACTCAGCGAAAGCATTTCCGGCAGAGCAGAGAAAATGTGTGGAAGGGTTCAAAACCTGATCCTTCTTCTCAAGATCCTGACTCCACCGACAATCCAAATCCTTCTTGGACCCCCTTCGCCACTCAGAACTCTGCTTTTGATGAGTATTACAAAGTTGTTGAAGGGGATGACACAGAGGCCGTTAAACCTTTGTCATGGTATCCTGAGAATCTTGCCTGGCATTCAAACTTCTCCCGTATGCAGCTGAGGAAGAATCAAATGCTTGAGAGGTTCCATGAATTCTTAAAGCTAGAAAATGAAATTGGAAATATTGCAAGACAGGAAGCTGTCAGCATGGTGATAGCAAATGATCTTGATGTTCAAAGATGTAATCTTCTCATTCACCAAACAAAAAGGATGTGCACAGCCAATCTTATCGTCGCTAATCATGAAGCTCAGAACTTTCCAGGCTATCGTTTAGTCAGAAATCATGAATCATTGGAACCAGAACAGCATATTGGCCAACTTTTATTTGATTGTATTCTCTGTGATGTCCCATGCAGTGGAGATGGAACCCTTCGCAAGGGACCTGATCTTTGGAGGAAATGGAATACTGGAACGGGAAATGGGCTTCATAGCCTACAAGTTCTAATAGTTATGCGAGGCTTATCATTACTTAAAGTCAGCGGAAGAATGGTCTATTCAACCTGCTCAATGAATCCAATTGAGAATGAAGCTGCGGTTGCAGAGTTACGTGACAGGGGCTTGTGGCTATCTTCCTATAAAGATGTTCCCATGTATCGAAGAAGTGCAGTTCTTCCCAGCATGTTTCCTTCAGGAAAAAACTATAAAGATCTGGTTGACAGTAATCACAAGATGGAGATGGGAGATGATATTGATAAGGGTGTTTGTGGAAACTCTGAAGATGGCAATCAAGCGGCAGAGAATCCTGTGACAGATAAGTTTACTGAGGAAGTTTCTGATTTACCACTAGAGCATTGCATGAGGATAGTTCCTCATGATCAAAACACTGGAGCTTTCTTTATTGCAGTACTGCAAAAGGTTTCTCCTCTTCCAGCAATTCCTATTCCAGAAAAAGGAAAAAATGAAATTGATAAACAGCATGGAGAACCAGAGAACCAGGATATTGAGGGTTCAAAAGTATTGCAGTTTGATTCATTAGAAAATACACACGAGGAAGCTTTGGAAGAGGTTAATGTAATTGATAACAAACCCAACACAGAAGATTTGGAAGCTAGTCCTTCTGGTGCATGTTTAGAAGGGGATTCAGAGGAAGTCCAAAAGCCTCTGGAAAAAGAAAGCATAGCAAAAATGACTCTAGGGAAAAGAAAGCTGCAGATTCAAGGCAAGTGGAGAGGTGTTGATCCTGTTTTCCTTTTCAAAGATGAAGACACTATTAATAGCATAAAGGATTTTTATGGTATCGATGAAAGGTTTCCATTCAATGGCCATCTTGTCACTAGAAACAATGAAAGAGGCCATGTGAAAAGAATTTACTATGTCAGCAAGTCAGTCAAAGAAGTTCTTGAACTGAATTTCTCAGTTGGGCAGCAACTCAAAATAGCATCCCTTGGTCTGAAGATGTTTGAAAGACAGACATCAAGGGAAGGAATCTCCGCTCCATGTGCTTTCCGAATATCATCTGAAGGATTGCCTCTTATTTTGCCATACGTTACCAAGAGGATTCTTCGCGCATCTCCTGGAGACTTCAAGCATCTTCTGCAGTACAAACCAATAAAATTTGCAGATTTTGTCGATGCTGAGTTTGGCAAAATGGCTGGAAACTTAACGACAGGCTATTGTGTGATAGTTCTAAGTAAAGGGAAAAGAGAAGCATCAGAATCCATTCAGGTGGACGAGTCCACCATAGCCATTGGATGCTGGAAAGGAAGGGCCAGTTTGAATGTGATGGTAACAGCAGCGGACTGCCGAGAACTGCTCGAAAGACTTTTAGTGCGCTTTGACGTAGAAAATGGTTCCTCTGTGCAAGAGAACACGCCCTCCAATAATGCCGTTGATGAAGAACAACGCCCTAACGGTTTAGATGACTCTCAAGCTCCTGGAGGCGACCATAGCTAA 5892 0.4043 MISIVSKVVEYMVSPISQGAGYIFCFNQFIGNVEQAKQELEVKLADVKKRKDEADRKTEEIMPSVKRWLDDVNAILDEVQKLQQELQGVGNKCFNVSLRYSLAKQMENKAKQMMDLKNNSNFEPFSLPTPLPSIVTHFSSKDFMDFDSRKSTYNRLLEAIKDGKNKIVGLYGMAGSGKTTLAKEVGKKVDGLKLFDKVVMAVISKTPNVFNIQQEIAEQVGLEFHQETTQFTRAQRLSSGLKSKRVLIILDDLWSKLCLEQIGIPIKEGCCVLLTTRLHDVCVSMDCESIIQLHLLTEEEAWALFKMRTETTNVSMNEFDSIGKEIVNGCKGLLIAIVTVASTLKGKSIQVWRSTLRRLQHPPPLDIEDDLKTPYAILEVSYDNLPSALAKSLFLLCSIFPEDHEIHIEDLIRFGKGTLKLGDNMYTMEEARNEILVTTQKLLDSCLLMRANMHACVKLHDVVRDVALWIGKKRCQEVLVDSNAVSNMLVSNHQILKDTKALSLWNVDKNFKLSNQLGCPTLEILLLQPHGSVEDLRAIEALKVLALITYGFGWRILGFWLKRYAICDPTIVSKYKLPFVKYLDGCDEGLRYLCIQGFKVSALSLSMKDLILRANCLWLENCWCEHKDINFEIKHLGVSCCQEKRFIIDNLDDVNDLQTQQVFSHLITLTLIKMNSLEQVFQDSSISHSLCELQELRIQSCPELRTCIFTHATVKSLPKLRKLEIVHCNKVKWLFSYSLAFHCPSLEELEIRRCSEFERLIDDEAAHDEDPLVHDIQDCPYGNETDRAYVGITLKSFNQLQNQQPLFLFLRLKSLKIKSSGSKKSIFEIQVSKTIEDEESIKAQEPLKLNSELRTLRLEGLPELEYICKGPTQIVSFHRLEHVTLWRCRRLKNIFTLIIVASLPEMRTLQVIACEEWEGIFCEESLKNLSSSSSSNVCFPKLMRIRISDSHKVRRMFSYSLASQCHSLEYLTINDCSQLERIVDKEAAHSGERLLHQRESLHDMQDYPRGNETDRAYVEVTLKSFNQLQNQQPLIIFLRLKSLEIISSGRKKGILEVQVRKIIEDEKSLKAPEPLKLKSELRTLRLEGLPELEYICKGPTQIVSLHRLEDVALRRCPRLKNIFTLAIVASLPEMRTLEVTKCEEWEGIFCEESLKSLSSSSSSNVCFPKLRNIIISDCHKVRRVFSYSLASHCPSLKEIHIRDCSQLEGVVQAYEGEVAGYDERLFTKLSVLDLKRLPKLSEIYPSYEFNLSDNKLNTPRKSSMGGRGKSRTQRKHFRQSRENVWKGSKPDPSSQDPDSTDNPNPSWTPFATQNSAFDEYYKVVEGDDTEAVKPLSWYPENLAWHSNFSRMQLRKNQMLERFHEFLKLENEIGNIARQEAVSMVIANDLDVQRCNLLIHQTKRMCTANLIVANHEAQNFPGYRLVRNHESLEPEQHIGQLLFDCILCDVPCSGDGTLRKGPDLWRKWNTGTGNGLHSLQVLIVMRGLSLLKVSGRMVYSTCSMNPIENEAAVAELRDRGLWLSSYKDVPMYRRSAVLPSMFPSGKNYKDLVDSNHKMEMGDDIDKGVCGNSEDGNQAAENPVTDKFTEEVSDLPLEHCMRIVPHDQNTGAFFIAVLQKVSPLPAIPIPEKGKNEIDKQHGEPENQDIEGSKVLQFDSLENTHEEALEEVNVIDNKPNTEDLEASPSGACLEGDSEEVQKPLEKESIAKMTLGKRKLQIQGKWRGVDPVFLFKDEDTINSIKDFYGIDERFPFNGHLVTRNNERGHVKRIYYVSKSVKEVLELNFSVGQQLKIASLGLKMFERQTSREGISAPCAFRISSEGLPLILPYVTKRILRASPGDFKHLLQYKPIKFADFVDAEFGKMAGNLTTGYCVIVLSKGKREASESIQVDESTIAIGCWKGRASLNVMVTAADCRELLERLLVRFDVENGSSVQENTPSNNAVDEEQRPNGLDDSQAPGGDHS 1963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0642 1963 Coils Coil 1655 1675 - -
Lele23g0642 1963 CDD AAA 149 255 - -
Lele23g0642 1963 Coils Coil 65 92 - -
Lele23g0642 1963 Pfam 16S rRNA methyltransferase RsmB/F 1382 1616 IPR001678 GO:0008168
Lele23g0642 1963 Gene3D Vaccinia Virus protein VP39 1356 1707 IPR029063 -
Lele23g0642 1963 MobiDBLite consensus disorder prediction 1286 1312 - -
Lele23g0642 1963 Coils Coil 30 57 - -
Lele23g0642 1963 MobiDBLite consensus disorder prediction 1676 1695 - -
Lele23g0642 1963 Gene3D Ribonuclease Inhibitor 473 764 IPR032675 -
Lele23g0642 1963 Gene3D - 295 380 IPR042197 -
Lele23g0642 1963 FunFam Probable disease resistance protein At1g61300 137 289 - -
Lele23g0642 1963 MobiDBLite consensus disorder prediction 1931 1946 - -
Lele23g0642 1963 Pfam NB-ARC domain 154 384 IPR002182 GO:0043531
Lele23g0642 1963 PRINTS Disease resistance protein signature 167 182 - -
Lele23g0642 1963 PRINTS Disease resistance protein signature 715 731 - -
Lele23g0642 1963 PRINTS Disease resistance protein signature 240 254 - -
Lele23g0642 1963 PRINTS Disease resistance protein signature 330 344 - -
Lele23g0642 1963 Gene3D Ribonuclease Inhibitor 1022 1266 IPR032675 -
Lele23g0642 1963 Gene3D Ribonuclease Inhibitor 793 1003 IPR032675 -
Lele23g0642 1963 SMART AAA_5 164 299 IPR003593 -
Lele23g0642 1963 SUPERFAMILY RNI-like 1071 1252 - -
Lele23g0642 1963 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1383 1619 IPR029063 -
Lele23g0642 1963 MobiDBLite consensus disorder prediction 1931 1963 - -
Lele23g0642 1963 ProSiteProfiles SAM-dependent MTase RsmB/NOP-type domain profile. 1384 1619 IPR001678 GO:0008168
Lele23g0642 1963 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 134 397 IPR027417 -
Lele23g0642 1963 MobiDBLite consensus disorder prediction 1255 1312 - -
Lele23g0642 1963 Gene3D - 135 292 IPR027417 -
Lele23g0642 1963 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 800 983 - -
Lele23g0642 1963 SUPERFAMILY RNI-like 661 1238 - -
Lele23g0642 1963 Gene3D - 381 468 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0642 Lele-ChrLele23 4878797 4894359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0642 149 378 WRKY Transcription Factor Family AT5G45050 25.410 8.78e-08 55.8