Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0628 ATGGGAAGATCTCCGTTCAGTGATGAAAATGGTCTGAAGAAAGGTCCTTGGACCCCTGAAGAAGACCACAAGCTTGTCCACCACATTCAGAAACATGGCCATGGAAGCTGGAGATCTCTCCCTAAACTAGCTGGGCTCAACAGATGTGGGAAGAGTTGCAGGTTAAGATGGACCAACTACTTGAGACCAGACATAAAGAGAGGGAAATTCTCCAAAGAAGAAGAACAGACAATTCTGAATCAACATGCTATCCTCGGCAACAAATGGTCGGCGATTGCGAGGTACTTGCCTGGTCGGACTGATAATGAAATAAAGAATTTCTGGAACACACACTTGAAGAAGAAGCTGATTCAAATGGGTTATGATCCTATGACTCATCAGCCTCGAACTGATATCTTCTCTAGTCTTTCTCATCTCTTAGCTCTCGCTAATCTTAAGAACCGTCTGGATCATAATGCTTCGAGCTTTGAATTTCTGCAACATCTTTTTCAACCTCGTACCAGTCATCATCAAGCAAACACAAACGTCGTGAACATTATGGACAGTTTCACTCATTTGAATAATTCACTTCATCAGTTAGACGACAACAACAACAACGTTGTTAATAATGAGTCTTCCATCGCTTTTTCTCGCATGCCTGAGTTAATTACTCATTCTTCTTCTTCGTTGATTAGTAAAGAAGACGTGGTTCAAATCCCAGAATATTGTACTGTGAACAAGGAAGAAGGGAGTGGTTGTTCACCTAATAATGCCACGTGGCTTCACTCGTGTGTGAGCACGCGGTCTCCTTCTTTTGTTCAGACCGAGACGGCAACGGCAACAACACATGGCATCAGTAATAGTATCGCCGATAACTGCTCTACGCTGGCGGCTTGCGACTTCGGAGAAGTTATGGATCAATACATGTGGCCGGAGTCAGAGCTGTTTCTAGAAGACCCTTTATTCCATGAGATTAATGCCTAG 963 0.4351 MGRSPFSDENGLKKGPWTPEEDHKLVHHIQKHGHGSWRSLPKLAGLNRCGKSCRLRWTNYLRPDIKRGKFSKEEEQTILNQHAILGNKWSAIARYLPGRTDNEIKNFWNTHLKKKLIQMGYDPMTHQPRTDIFSSLSHLLALANLKNRLDHNASSFEFLQHLFQPRTSHHQANTNVVNIMDSFTHLNNSLHQLDDNNNNVVNNESSIAFSRMPELITHSSSSLISKEDVVQIPEYCTVNKEEGSGCSPNNATWLHSCVSTRSPSFVQTETATATTHGISNSIADNCSTLAACDFGEVMDQYMWPESELFLEDPLFHEINA 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0628 320 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 217 - -
Lele23g0628 320 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele23g0628 320 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele23g0628 320 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Lele23g0628 320 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele23g0628 320 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lele23g0628 320 Gene3D - 68 131 - -
Lele23g0628 320 Gene3D - 11 67 - -
Lele23g0628 320 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele23g0628 320 FunFam MYB-related transcription factor 13 66 - -
Lele23g0628 320 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Lele23g0628 320 FunFam MYB transcription factor 68 129 - -
Lele23g0628 320 CDD SANT 16 61 IPR001005 -
Lele23g0628 320 SMART sant 66 114 IPR001005 -
Lele23g0628 320 SMART sant 13 63 IPR001005 -
Lele23g0628 320 CDD SANT 69 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0628 Lele-ChrLele23 4798221 4799383 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0628 1 209 MYB Transcription Factor Family AT5G10280 58.590 2.09e-92 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele23g0628 Myb_DNA-binding 3.9e-16 CL0123