Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0620 ATGTGTGGAATACTTGCAGTCTTGGGTTGCATTGAGAACTCTCAGGCCAAGCGTTCTCGGATAATCGAATTGTCTCGGAGGTTACGACATCGGGGTCCTGATTGGAGTGGCTTGCATTGCCACGAAAACTGTTATCTTGCCCATCAACGACTGGCTATTATCGATCCTTCCTCAGGGGATCAACCTCTATATAATGAAGACAAGACTGTTGCTGTCACTGTAAATGGAGAGATATACAACCATAAAGAATTGAGAAAAAAACTGACTTCTCATCAATTTCGCACTGGAAGTGACTGTGAAGTGATTGCCCACCTTTATGAAGAATATGGTGAAGACTTCATTGACATGTTGGATGGCATGTTCTCTTTTGTCCTCCTAGACACTAGAGATAAAAGCTTCATTGCAGCTCGTGATGGTATTGGGATTACCCCTCTTTACATGGGCTGGGGTCTCGATGGATCTATATGGTTCGCATCTGAAATGAAAGCTTTGAGTGATGATTGTGAAAGATTCATATCTTTTCCTCCTGGGCATTTATATTCCAGCAAACAGGGAGACCTAAGAAGGTGGTATAACCCCCCTTGGTACTCAGAGAACATTCCATCAACTCCATACAGTTCTCTGGTTTTACGTGAGGCGTTTGAGAAGGCTGTAGTTAAGAGACTTATGACTGATGTGCCATTCGGAGTTCTGTTGTCTGGAGGACTAGATTCATCACTGGTTGCGGCAGTTGCCAACCGTCATTTGGCCGAATCAGAAGCTGCTCGTCAGTGGGGATCACAGCTACATACCTTTTCTGTTGGTTTAGAGGGTTCACCAGATTTGAAAGCTGCCCGAGAGGTAGCAGATTATATTGGTACTCGTCACCATGAATTTCATTTCACTGTTCAGGAAGGTATAGATGCGCTTGAAGAAGTCATTTACCATATAGAAACATATGATGTAACAACTATCAGAGCAAGCACTCCTATGTTCCTTATGTCTCGGAAAATTAAATCTTTGGGAGTGAAAATGGTTCTTTCTGGGGAAGGTTCAGATGAAATATTTGGAGGTTACCTGTACTTCCACAAGGCACCTGACAAGGAAGAATTTCACCAAGAAACATGTCGAAAAATCAAAGCACTACATCTTTATGACTGCCTGAGAGCCAATAAATCAACTTCAGCATGGGGTTTAGAGGCACGTGTACCATTCTTGGATAGAGAATTCATCAACATAGCGATGAGCATAGATCCAGAGTGTAAAATGATAAGGACTGATATTGGAAGGATAGAGAAGTGGGTTCTACGCAATGCATTTGATGATGATCAGAAGCCATATTTACCGAAGCACATATTGTATAGGCAGAAGGAACAGTTCAGTGACGGTGTTGGGTACAGCTGGATTGATGGCTTGAAGGAGCATGCCAACAAACAAGTCACAGATGCAATGTTGATGAAGGCAAGTTTTATTTATCCAGAAAACACTCCTACCACGAAGGAAGCATACTTTTACAGAACAATTTTTGAGAAGTTCTTCCCCAAGAATGCTGCTAGGTCAACAGTTCCTGGAGGCCCCAGTGTGGCGTGCAGTACAGCAAAAGCTGTGGAATGGGACGCAGGTTGGTCAAAAAATCCCGATCCTTCTGGTAGGGCTGCACTTGGCGTTCATGAAGCAGCATATGATGATGAAGCAAAAGTTGCCAAACCCATCAATGGTGCCCAGTAA 1707 0.4335 MCGILAVLGCIENSQAKRSRIIELSRRLRHRGPDWSGLHCHENCYLAHQRLAIIDPSSGDQPLYNEDKTVAVTVNGEIYNHKELRKKLTSHQFRTGSDCEVIAHLYEEYGEDFIDMLDGMFSFVLLDTRDKSFIAARDGIGITPLYMGWGLDGSIWFASEMKALSDDCERFISFPPGHLYSSKQGDLRRWYNPPWYSENIPSTPYSSLVLREAFEKAVVKRLMTDVPFGVLLSGGLDSSLVAAVANRHLAESEAARQWGSQLHTFSVGLEGSPDLKAAREVADYIGTRHHEFHFTVQEGIDALEEVIYHIETYDVTTIRASTPMFLMSRKIKSLGVKMVLSGEGSDEIFGGYLYFHKAPDKEEFHQETCRKIKALHLYDCLRANKSTSAWGLEARVPFLDREFINIAMSIDPECKMIRTDIGRIEKWVLRNAFDDDQKPYLPKHILYRQKEQFSDGVGYSWIDGLKEHANKQVTDAMLMKASFIYPENTPTTKEAYFYRTIFEKFFPKNAARSTVPGGPSVACSTAKAVEWDAGWSKNPDPSGRAALGVHEAAYDDEAKVAKPINGAQ 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0620 568 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 209 484 - -
Lele23g0620 568 PIRSF Asn_synthetase_glu-h 1 359 IPR006426 GO:0004066|GO:0006529
Lele23g0620 568 PIRSF Asn_synthetase_glu-h 357 516 IPR006426 GO:0004066|GO:0006529
Lele23g0620 568 FunFam Asparagine synthetase [glutamine-hydrolyzing] 195 514 - -
Lele23g0620 568 Gene3D HUPs 195 514 IPR014729 -
Lele23g0620 568 Pfam Asparagine synthase 210 361 IPR001962 GO:0004066|GO:0006529
Lele23g0620 568 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 2 192 IPR029055 -
Lele23g0620 568 TIGRFAM asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 366 IPR006426 GO:0004066|GO:0006529
Lele23g0620 568 CDD Asn_Synthase_B_C 211 456 IPR001962 GO:0004066|GO:0006529
Lele23g0620 568 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 1 195 IPR029055 -
Lele23g0620 568 FunFam Asparagine synthetase [glutamine-hydrolyzing] 2 192 - -
Lele23g0620 568 CDD AsnB 2 192 IPR033738 -
Lele23g0620 568 Pfam Glutamine amidotransferase domain 48 165 IPR017932 -
Lele23g0620 568 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 2 185 IPR017932 -
Lele23g0620 568 PANTHER ASPARAGINE SYNTHETASE 1 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0620 Lele-ChrLele23 4719195 4723866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0620 69 164 PRT Gene Family AT2G16570 36.792 5.34e-08 53.9