Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0614 ATGGCAGACACTTCGCCGGACCGGAGATCGGGTTGTGGGTTACTGAGTGCAGTGTTTGGACGACGCCCACGTAGATCACACCCTTCACATACTTCTCCTACGTCCCATCACGTTAATAATAATAATAATGTCATGCAAAATGGAAAACCGTCCTCAGACATGTGGAATTCAAAGCGCCGGCGAGGCCCCTTCGACAACCACGCCGATTTACTCCCCACCAACCACCCACAGACGCGTGTCGTCATGATTCAAAACCAGCAAACGAAACAACATGTCAACGAAACATCAAAAGCGACAACACCACAAGGCCGATCAAAGGTTCCCAAAGAAGCCCTCGGAATTTCCGGCGAGCTTGAAAGTTATATCACCGATCACCAGAAATCCAAAGGAAGTAGCATTCTTGTTCGCGCTTCCTCCAGCAACGTGATGCTGTTTGGAGATTTAGGAAACTTGAGACAAGGTGGTGGAGGAGGGAATAATACAAATTCTTACAGCGTAATAGATCACCTTCCTAAGCCTAAAGAAGAAACCTTGATAGCTAACAATGGTGAAAGAAGATGCACAAATAATGCAGGGAATAGAACGAAAGAGAACAAGAAAGAAGAAGGGGTTTCTCTTTGCAGAGCTATATCAACGAGAATGGATCCAGAGCAGTTAAAGATAATGGGGAATGAGGATTACAAGAACGGGAGGTTTGCAGAGGCATTGGCTCTGTATGATGCAGCCATCGCCATTGATCCTAACAAAGCTTCATATAGAAGTAACAGAAGTGCGGCATTAACGGCACTTGGAAGGCTTATCGAGGCCGCCTTTGAGTGTAGAGAAGCCATTCGAATCGAACCTCATTACCATAGAGCTCATCATCGATTGGGAAGTTTGTACCTTAGATTAGGTGAAACAGACAAGGCACAGTATCATTTGAAACATGCGGGACCAGATGCAGATCCTGATGAGATTGCTAAGGTGAGGAATCTTCAAGTTAATCTTAACAAGTGCACTGAGGCTCGTAGGTTACGAGATTGGAACACAGTTAAAAAGAAGGCCAACTCTGCTATATTATGTGGTGCAGATTCTGCTCCTCAGATATTTGCTTTGCAAGCTGAAGCCCTTCTAAAGCTTCGTAAGCATCATGATGCCGTTGAAGTAATGTCAAAAGGTCCTAATTTTACAGACGAAGAGCTGAACAAGTTCCTTGGACCTATTGGTTTCGCTAATTTGTTGGTCACACGGGCTCAGGTTGATATGGCTGCTGGAAGATTTGATGATGCATTGGAGGTGGCTCAACGAGCAGTGAAGTTGGACTCAAATAACAAGGAAGCAGGCATGGTGATGAGGAGAGCAGGAGCAGTAGCAGCAGCAAGGTCAGAAGGAAACGAGCTTTTTAGAGGGAGTAGATTCTCAGAGGCATTAACAGCCTATGGAGAGGGGCTTGAGCATGATCCTTGTAACTCAGTTTTGTTGTGCAACCGAGCCGCTTGCCGGTCGAAATTGGGCCAATTCGAGAGAGCCGTGGAGGATTGCACTGCTTCTCTCAATCTAAGGCCTTCATACAGCAAAGCCAGATTGAGAAGAGCCGACTGTAATGCTAAGTTGGAAAGATGGGAAGCTTCAATACAAGACTACGAGATATTTCTGAGAGAAACACCAGAAGATGAGGAAGTAAGAAAGGCGTTGATGGAGGTTCAGAAACAGCTAAAGGGACAACGAGGAAAAGAGTTGTAG 1722 0.4564 MADTSPDRRSGCGLLSAVFGRRPRRSHPSHTSPTSHHVNNNNNVMQNGKPSSDMWNSKRRRGPFDNHADLLPTNHPQTRVVMIQNQQTKQHVNETSKATTPQGRSKVPKEALGISGELESYITDHQKSKGSSILVRASSSNVMLFGDLGNLRQGGGGGNNTNSYSVIDHLPKPKEETLIANNGERRCTNNAGNRTKENKKEEGVSLCRAISTRMDPEQLKIMGNEDYKNGRFAEALALYDAAIAIDPNKASYRSNRSAALTALGRLIEAAFECREAIRIEPHYHRAHHRLGSLYLRLGETDKAQYHLKHAGPDADPDEIAKVRNLQVNLNKCTEARRLRDWNTVKKKANSAILCGADSAPQIFALQAEALLKLRKHHDAVEVMSKGPNFTDEELNKFLGPIGFANLLVTRAQVDMAAGRFDDALEVAQRAVKLDSNNKEAGMVMRRAGAVAAARSEGNELFRGSRFSEALTAYGEGLEHDPCNSVLLCNRAACRSKLGQFERAVEDCTASLNLRPSYSKARLRRADCNAKLERWEASIQDYEIFLRETPEDEEVRKALMEVQKQLKGQRGKEL 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0614 573 Pfam Tetratricopeptide repeat 473 505 - -
Lele23g0614 573 MobiDBLite consensus disorder prediction 32 53 - -
Lele23g0614 573 MobiDBLite consensus disorder prediction 1 64 - -
Lele23g0614 573 ProSiteProfiles TPR repeat profile. 216 249 IPR019734 GO:0005515
Lele23g0614 573 Pfam TPR repeat 223 264 - -
Lele23g0614 573 MobiDBLite consensus disorder prediction 88 103 - -
Lele23g0614 573 MobiDBLite consensus disorder prediction 88 108 - -
Lele23g0614 573 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 7 572 IPR044534 -
Lele23g0614 573 SMART tpr_5 484 517 IPR019734 GO:0005515
Lele23g0614 573 SMART tpr_5 404 437 IPR019734 GO:0005515
Lele23g0614 573 SMART tpr_5 250 283 IPR019734 GO:0005515
Lele23g0614 573 SMART tpr_5 216 249 IPR019734 GO:0005515
Lele23g0614 573 SMART tpr_5 450 483 IPR019734 GO:0005515
Lele23g0614 573 SMART tpr_5 518 551 IPR019734 GO:0005515
Lele23g0614 573 SUPERFAMILY TPR-like 216 440 IPR011990 GO:0005515
Lele23g0614 573 Gene3D Tetratricopeptide repeat domain 214 570 IPR011990 GO:0005515
Lele23g0614 573 ProSiteProfiles TPR repeat profile. 404 437 IPR019734 GO:0005515
Lele23g0614 573 SUPERFAMILY TPR-like 452 566 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0614 Lele-ChrLele23 4650226 4652691 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0614 217 352 U-box Gene Family AT3G07370 27.027 3.86e-06 47.0