Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0611 ATGTCAAGAATGGCTCAAAAGAGGTCTAAACCTAGAGCTAGGGTTTGCTTGGATGCCAGTATTCTGCTGTATGGTACACGTGGCATTTATCCATTGGATACACTTCATCGAAGATTGGAATTATTGGAGTTGACGAGTTGGAGTCTGAATAACATAACACCATATTTGATGGATCCTTACGGTGAAGAGTTGATGAAAGCACTCCAACCTTTCAACCCTCCTTCATCATCTTCCTTTTCTTCTCTCCTCAATTCCTCCATCCAAACAAGTCCCATCAGGCTCAACCAGCTCACACCATCACAAATTCAAGAAATCCAATCCCAAATCCACACCAAACGTCGCCGTTTCACTCAGAAATCCCTCCCCATGAAGCAACCTGGTAATAGTCCTCCTAAACCAACAAAACTATACAGAGGAGTCAGACAGAGACATTGGGGTAGATGGGTCGCCGAGATCCGACTGCCCAAGAACCGTACCCGACTCTGGCTAGGCACCTTCCATACGGCAGAGGAAGCTGCTTTAGCCTACGACAACGCCGCCTATAAGCTCCGAGGAGACTTTGCTCGCCTCAATTTCCCTCACTTGCGCCACCACGGAGCTCATGTCATTTCTGAATTCGGCGATTACAAGCCTCTTCACTCATCTGTGCACGCCAAGCTCCAAGCCATATCTGAAAGCTTAGCAGACAATTCCCGGAAACAGGGTAATGCAGAGCATCCTCATCTTCAGAATACACATGTTTGTTCTACTCTCTCTAACTTAGCCTCGTCATCCGATGAATCGGAGATTAGTTACTTGGATTTCTCGGATTATAAAGTGGATGAAACAGAGGTTGTTGGTTTGGACAAGTATCCTTCCATTGAGATTGATTGGTCTGCTATCTGA 885 0.461 MSRMAQKRSKPRARVCLDASILLYGTRGIYPLDTLHRRLELLELTSWSLNNITPYLMDPYGEELMKALQPFNPPSSSSFSSLLNSSIQTSPIRLNQLTPSQIQEIQSQIHTKRRRFTQKSLPMKQPGNSPPKPTKLYRGVRQRHWGRWVAEIRLPKNRTRLWLGTFHTAEEAALAYDNAAYKLRGDFARLNFPHLRHHGAHVISEFGDYKPLHSSVHAKLQAISESLADNSRKQGNAEHPHLQNTHVCSTLSNLASSSDESEISYLDFSDYKVDETEVVGLDKYPSIEIDWSAI 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0611 294 CDD AP2 135 195 IPR001471 GO:0003700|GO:0006355
Lele23g0611 294 SMART rav1_2 136 199 IPR001471 GO:0003700|GO:0006355
Lele23g0611 294 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 70 294 - -
Lele23g0611 294 Pfam AP2 domain 137 185 IPR001471 GO:0003700|GO:0006355
Lele23g0611 294 Gene3D AP2/ERF domain 136 194 IPR036955 GO:0003700|GO:0006355
Lele23g0611 294 SUPERFAMILY DNA-binding domain 136 194 IPR016177 GO:0003677
Lele23g0611 294 FunFam Ethylene-responsive transcription factor 2 135 194 - -
Lele23g0611 294 MobiDBLite consensus disorder prediction 113 136 - -
Lele23g0611 294 ProSiteProfiles AP2/ERF domain profile. 136 193 IPR001471 GO:0003700|GO:0006355
Lele23g0611 294 PRINTS Ethylene responsive element binding protein signature 137 148 IPR001471 GO:0003700|GO:0006355
Lele23g0611 294 PRINTS Ethylene responsive element binding protein signature 159 175 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0611 Lele-ChrLele23 4609818 4611419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0611 58 294 AP2-EREBP Transcription Factor Family AT4G39780 48.507 2.37e-71 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele23g0611 AP2 9.3e-14 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1404 21 22522484 22523200 Lele23g0611 23 4609818 4611419 hybridization
Lele22g1397 22 19773558 19774250 Lele23g0611 23 4609818 4611419 hybridization