Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0604 ATGGTGAAGGTTAGAGATCAATGGTGCTACACTTTGGAAGAACTGGTGGAGCTTGACAGGAACGAACAACACAAGAGAGACGAGTGGGTGAGGAATCCTCCAGAGTTTCCGAGTCCATGGAGGCAATTATGGGACACAGCCAAGGACACTTATGTACCTACTCATCGTAACATCGATAATCACAAGCCCCTCTTCAAACGTATTCTTTCTCTGGTTTATCACTTCTTTCCCATATTGGACTCTCTCAGATATTACAATGCCTCCAAGTTTAAGAGCGACTTGTTGGCTGGCCTCACTCTTGCCAGCCTCACCATTCCTCAGAGCATGGGATATGCAACTATGGCTGAGCTTAATCCTAAATATGGACTGTATACAAGCATTGTGCCACCTATCATATTTTCTTTACTCACAAGCTCAAGGGAAATAGTGATCGGACCTGTATCTGTGGATTCAGTGCTTCTTTCCACAATGATTGGAAAATTGAAAGATCCTCATCACGATTCTGCTGCTTACACACACCTCGTTTTCACTGCAACTTTCTTTACTGGAATCTTTCAGGTTTCCTTTGGACTCTTCAGGTTAGGGTTTCTGGTGGATTATTTTTCCCATGCAGCGATTGTGGGGTTCTTGGCAGGAGCTGCTGTTATGATTTGCTTTCAGCAAATGAAAGGACTTCTTGGGATCACGAACTTCACAAACAAAACTGATGTAATTTCTGTCATCAAAGTTGTTTGGACATCAGTGACGACTGACCAATCGAAGTGGCATCCTTCTAGTTTAATTCTTGGGTTCTCAGTTCTGGCTTTCATTCTGATTACCAGATATATGGGTAGAAGGCACAAGAAACTCTTCTGGCTGTCGACATTCGCTCCTCTACTCTCAGTGATTATATCGTGTCTTATTGTATTTAGAATTAATGGTGATAATCAAGATCATAAAGTTGAGGTCTTGGGAAAAATCGATGGAAGTAGCTTGAACCCTAGTTCACTGTACCAGTTAAACTTTGACTCCAAGTTCATTGGGAGTTTGATCAAGATTGGGTTTATTATTGCCATAATTTCACTCACGGAAGCTATCGCAGTTGGTCGATCTTTTGCGGCCTTAAGAGAATACAATCTTGATCCCAACAAAGAAATGGTGTCATTAGGCCTAATAAACATTGTTGGATCTTTCACTTCTTGCTATGTTGCCTCAGGTTCATTTTCACGTACAGCAGTAAACTATAGCTGTGGCTCGGAAACAATGGTTTCGAACATAGTGATGGCTCTCACAGTGCTGTTTTCACTGAGACATTTGAAAACGTGGTTGTATTCCACTCCAACAGCAGTGCTTGCTTCAATAATCCTTTCAGCTTTACCAGGAATCATTGACGTTAACAAAGCTATCCACATTTGGAAGGTTGATAAGATTGATTTCCTTGCTTGCGCTGCAGCCTTCTTCGGCATCTTGTTTTTCTCTGTGGAAACTGGTCTTATAACTGCGGTGATAATATCATTTGCGAAAATAATGCTGATATCAATTCAACCTGGGATAGCAATTGTGGGAAGACTTCCAGGTACAGATGAGTTCTGCGATGCTGAACAATATCCTATGGCTGTCAACATTCCTGGAGTCTTGATTGTTCGTGTCAAATCTGCTAGTCTTTGTTTTGCAAATTCCAATCTTGTCAAGGAAAGAATTGTGAGACGGGTGATTGATGACAAAGCCGTTGTGGAAGATCCCAAAGCACAAAGCACCTTCAAATACGTTGTCCTTGACATGTCAAGTCTCATGAACATTGACACAGCGGGGATTGCTTCTCTGGATGAGCTGCATATTAGTTTGGCTTCACATGGCCTACGATTGGCCATCGCCAACCCCAGGTGGCAAGTAATTCACAAGCTAAGAATAGCTAAGTTTGTCGACAAAATAGGAGAAAGGGTTTTTCTGTCTGTAGGAGAAGCCGTTGAAGCATGTCTTACCACCAAAATGGCTGCCATTTATCCATAA 1989 0.4208 MVKVRDQWCYTLEELVELDRNEQHKRDEWVRNPPEFPSPWRQLWDTAKDTYVPTHRNIDNHKPLFKRILSLVYHFFPILDSLRYYNASKFKSDLLAGLTLASLTIPQSMGYATMAELNPKYGLYTSIVPPIIFSLLTSSREIVIGPVSVDSVLLSTMIGKLKDPHHDSAAYTHLVFTATFFTGIFQVSFGLFRLGFLVDYFSHAAIVGFLAGAAVMICFQQMKGLLGITNFTNKTDVISVIKVVWTSVTTDQSKWHPSSLILGFSVLAFILITRYMGRRHKKLFWLSTFAPLLSVIISCLIVFRINGDNQDHKVEVLGKIDGSSLNPSSLYQLNFDSKFIGSLIKIGFIIAIISLTEAIAVGRSFAALREYNLDPNKEMVSLGLINIVGSFTSCYVASGSFSRTAVNYSCGSETMVSNIVMALTVLFSLRHLKTWLYSTPTAVLASIILSALPGIIDVNKAIHIWKVDKIDFLACAAAFFGILFFSVETGLITAVIISFAKIMLISIQPGIAIVGRLPGTDEFCDAEQYPMAVNIPGVLIVRVKSASLCFANSNLVKERIVRRVIDDKAVVEDPKAQSTFKYVVLDMSSLMNIDTAGIASLDELHISLASHGLRLAIANPRWQVIHKLRIAKFVDKIGERVFLSVGEAVEACLTTKMAAIYP 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0604 662 Pfam Sulfate permease family 90 477 IPR011547 GO:0016020
Lele23g0604 662 SUPERFAMILY SpoIIaa-like 535 652 IPR036513 -
Lele23g0604 662 CDD STAS_SulP_like_sulfate_transporter 529 643 - -
Lele23g0604 662 FunFam Sulfate transporter 31 508 655 - -
Lele23g0604 662 TIGRFAM sulP: sulfate permease 77 646 IPR001902 GO:0016020|GO:0055085
Lele23g0604 662 PANTHER SULFATE TRANSPORTER 59 653 IPR001902 GO:0016020|GO:0055085
Lele23g0604 662 ProSiteProfiles STAS domain profile. 545 652 IPR002645 -
Lele23g0604 662 Pfam STAS domain 529 648 IPR002645 -
Lele23g0604 662 Gene3D STAS domain 508 656 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0604 Lele-ChrLele23 4535498 4541753 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0604 21 657 Inorganic Solute Cotransporters AT5G10180 56.942 0.0 735
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1412 21 22594732 22603520 Lele23g0604 23 4535498 4541753 hybridization