Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0596 ATGACGACTACACTTGCATGGAGGTTTGGTTCCAGTAATGGCGGCGGCCTTGCTGCTAATGATATGGAAAGAAATGGCGAGGGGAACATTCCAGATTCAGGGCCCCCAACTCCACATTCTGTTTTGAAGATGGGATTGAGAGATCGCAGCAGCAGCATGGAGGATCCAGATGGGACATTAGGAAGTGTTGCCCAATGCATTGAGCAGCTGCGACATGGCTCATCCTCTGCACAAGAGAAGGAGTACTCCTTGAGGCAGTTATTGGAGCTTATTGATATGCGTGAAAATGCGTTTAGTGCTGTTGGATCTCATTCTCAGGCAGTACCAGTGCTTGTTTCACTTCTCCGATCCGGTTCATTGAGTGTGAAGATTCAGGCAGCGACTGTTTTGGGCTCCCTTTGTAAAGAAAATGAGCTAAGAGTGAAAGTCTTGCTTGGAGGATGCATTCCCCCATTGCTTGGGCTACTAAAATCCAGTTCAGCCGAAGGTCAAGTTGCTGCTGCAAAGACTATTTATGCTGTCTCTCAAGGCGGCTCAAAAGACCATGTTGGATCAAAAATTTTTTCAACTGAAGGCGTAGTTCCTGCGCTGTGGGAGCAGCTTCAGAAGGGGCTGAAGACTGGAAATGTAGTTGATGGTTTATTGACCGGAGCCTTGAAAAATCTGTCCAGTAATACTGAGGGATTCTGGAATGCAACAATACAAACTGGAGGAGTGGACATATTAATGAAGTTATTGACATCAGGGAATCCTAGCACTTTAGCTAATGTGTGCTTCTTACTTGCCAGCATGATGATGGAGGATGCATCTGTTTGTTCAAAGGTTTTGACTTCAGAGGCGACAAAACAACTCCTGAAATTATTGGGCCCCGGTAATGATGCCCCTATTAGAGCTGAAGCAGCTGGTGCTCTGAAATCCTTGTCTTCGCAGTGCAAAGAAGCAAGGCGCGAGATATCTAATTCTAATGGCATTCCTGCTTTGATCAATGCTACCATAGCTCCTTCCAAAGAGTTCATGCAGGGTGAGCATGCTCAAGCATTGCAGGAAAATGCTATGTGTGCTCTAGCTAACATCTCTGGTGGTTTGTCTTATGTCATCTCCAGCCTTGGTCAAAGCCTTGAATCATGCACCTCAGCTACTCATATTGCTGATACATTGGGGGCTTTGGCTTCAGCTCTTATGATATATGATAACAAGGCCGAAGCTACTAGAACATCAGATCCGTTGGTAGTTGAGCAAACATTGCTCAAGCAATTTAAATCTCAATCGCAGTTTCTTGTGAAGGAAAGAACAATTGAAGCCCTGGCTAGTTTGTATGGAAATCCCGTACTGTCAATTAAACTTGCAAATTCAGATGCAAAACATTTGCTAGTCGGATTAATAACGATGGCTGTTAATGAAGTGCAAGATGACCTTATAAGAGCCCTCCTTACACTGTGTAACAATGAAGGCAGTCTTTGGCGTGCCCTTCAGGGCCGTGAAGGAGTTCAGCTGTTGATATCTCTTCTGGGGCTCTCATCCGAACAACAGCAAGAATGTGCAGTTGCTCTGCTATGCCTTCTATCTAATGAAAATGATGAAAGTAAGTGGGCCATTACTGCTGCTGGTGGTATACCTCCATTAGTTCAAATTTTAGAGACAGGATCCACAAAGGCAAAGGAAGACTCGGCAAAAATCCTTACAAACCTGTGCAATCACAGTGAAGATATACGTGCTTGTGTGGAGAGTGCTAACGCTGTTCCTGCATTGTTGTGGCTATTGAAGAATGGGAGCTCAAATGGGAAGGAAATTGCGGCGAAAACCTTAAATCACTTAATTCATAAATCTGATACTACCACAATCAGTCAGCTTACAGCATTATTGACAAGTGATCTACCCGAATCTAAGGTCTATGTTTTGGATGCTTTGAGAAGTATGCTGTCAGTTTCCCCTCTTAGCGACATTCAACGAGAAGGTAGTGCTGCGAGTGATGCAATTGATACAATGATAAAATTAATGAGCTCTACCAAAGAAGAAACTCAGGCTAAGTCAGCATCAGCTCTAGCAGGCATCTTTGAAATGAGGAAAGATGTGCGTGAAAGCAGCGTCGCTGTAAAATCCCTTTTGTCTGCCATGAAGTTGCTTGATACTGAATCTGAAAGTATCCTAATAGAGTCTTCACGCTGCCTGGCGGCAATATTTCTTTCGATTAAAGAGAACAAGGATGTAGCTGCTGTTGCTAGAGATGCATTACTCCCCTTAGTTGCACGTGCAAATTCTTCTACTTTGGAAGTTGCAGAGTTGGCAACATGTGCGGTGGCTAATCTTATTTTAGATAGTGAGATTTCAGAGAAAGCTGTTGCTGAAGAAGTTATCATGCCGGCTACCAGGGTATTACGTGAAGGCACAGTTTCTGGAAAAACCCATGCAGCAGCAGCAATTGCTCGGCTCATACATGCTCGACAAGTTGATTATTCTATAACTGAATGTGTTAATCGTGCTGGGACTGTGCTTGCTTTAGTTTCCTTCTTGGATTATTCTATTAATGGATCTGTTTCCACATCTGAGGCTATAGAAGCACTTGCCGTTCTGTCCAGGTTGGAACAGAACAGTACACATATTAAACCAGCATGGGCTGTGTTGGCTGAATTCCCTGAAAGTATAAACCCAATAGTGCTGTCTATTGCTGATTCAACACCAATTTTTCAGGATAAAGCTATAGAGATATTATCCCAGTTATGCAGGGATCAGCCTGTTGTTCTTGGAAACAATGTTGTTGCGGCCTCAGGATGCTTGTGTTCATTGGTTAAAAGGGTAATTGGTACCAAAAATGTAAAGGTCAAAATTGGGGGAGCTGCACTTCTTATTTGTGCTGCCAAAGTAAACCACCAGAGACTGGTGGAGGAACTCAACCAAGCAAACTTGTCTGTTGATCTTGTTCAATCTCTTGTTAGTATGCTTTCTTCTGCGTTGCCCTTGTCAAACCAGAGTGAAGAAAACAAGAAATTTATTAGCATTATCATAAATAGAAAAGAAGAGGTCAATGGTGGTAAATTCAACACAGGCACTGCCATTGTATCTGATGCCAACTTAGCTATATTGTTATTGTCTATTCTTGCTTGTCATGATGAAAAATGTAAAATTGCAATAATGGAGGCTGGAGCAATTGACATTCTCACTGAAAAAATCTCAGACTCTTACTCGCAATATAACCAGATTGATTATAAAGAAGATAGTAGCATGTGGATTTGTGCATTGTTGTTGGCTGTATTATTTCAAGATAGAGATATCATCAGAGCACATGCTACCATGAAATCTGTACCAGCTGTTGCCAGTTTGTTGAAGTCAGAAGAATTAGCTAACAGATATTTTGCAGCACAGTCAATAGCTAGCCTAGTCTGTAACGGAAGCAGGGGTACACTACTGTCTGTTGCGAACTCAGGGGCTGCAAGTGGGCTAATCTCCTTACTTGGCTGTGCTGACATTGACATACAGGACCTTCTGGACTTGTCAGGGGAGTTCTCCTTGGTCCGTTATCCTGATCAAGTTGCTCTTGAGAGGCTGTTCAGAGTTGATGACATCAGAGGTGGTGCCGCTTCGCGGAAGGCAATACCGGCCCTTGTTGATCTGCTCAAACCAATTCCAGATCGCCCAGGAGCACCCTTTTTAGCTCTTGGACTTCTAACTCAGCTCGCCAGAGATTGCCCATCTAATAAGATTGTAATGGTAGAATCTGGGGCCCTGGAGGCACTTACAAAGTATCTTTCACTGGGTCCCCAAGATGCCACTGAAGAAGCCGCTACTGATCTATTGGGAATTCTTTTTGACAGTGCTGAGATACGGAGACATGAGGCAGCATTTGGTGCTGTTACTCAACTTGTAGCTGTGTTGCGTTTAGGGGGAAGAGGTGCAAGGTACAGTGCTGCCAGAGCCCTGGAAAATTTGTTCTCTGCTGATCAGATTAGGAATGCAGAGACTGCCCGACAAGCTGTTCAACCCTTGGTGGAGATTCTTAACACTGGTTTAGAGAAGGAGCAGCAAGCTGCAATTGCTACATTGGTTAGGCTCCTAAGTGAAAATCCGTCGAGAGCACTAGCTGTTGCTGATGTTGAAATGAATGCAGTAGATGTGCTTTGCAGGATCCTTTCATCAAATTGTTCATTGGACCTCAAAGGTGATGCTGCTGAATTATGTTGTGTTCTGTTTGGAAATACACGGATTAGGTCCTCAGTGGCTGCTGCACGCTGTGTTGAACCTCTAGTTTCTCTCCTTGTAAGCGAGTTTAGCCCTGCCCAGCATTCAGTTGTGCGCGCACTGGATAGGCTTGTTGATGACGAGCAATTGGCTGAACTAGTTGCTGCTCATGGTGCCATTATTCCTCTTGTTGGTCTTCTTTACGGTAGGAATTATTTGCTCCATGAGGCCATTTCTAGAGCTCTGGTTAAGCTAGGGAAAGACAGACCTGCTTGTAAAATGGAAATGGTCAAAGCTGGAGTTATTGAAAGCATACTTGACATTCTTCATGAAGCACCTGATTATCTGTGTGCGGCATTTGCAGAATTGCTGCGTATATTGACCAATAATGCCAGCATAGCTAAAGGGCAGTCTGCTTCTAAAGTGGTTGAGCCCCTATTTTTGTTGCTGACGAGACAAGAGTTTGGGCCTGATGGACAGCACAGTGCGTTGCAGGTTTTGGTTAATATCTTGGAACATCCACAATGTCGTGCTGACTATACATTGACATCCCACCAAGCTATTGAACCACTTATCCCCTTGCTCGATTCTCCAATACCAGCAGTGCAACAGTTGGCTGCTGAGCTTCTCTCGCATCTCCTTTTGGAAGAACACCTTCAGAAGGATCCAGCTACACAGCAGGTAATTGGTCCTCTTATTCGAGTTCTTGGTTCAGGTATCCACATATTGCAGCAGAGAGCTGTGAAGGCCCTGGTTAGTATTGCACTGATATGGCCAAATGAAATTGCAAAAGAGGGTGGTGTTGTTGAACTCTCAAAAGTGATACTGCATGCTGATCCTTCCCTTCCTCATGCTTTATGGGAATCTGGTGCTTCTGTTTTGTCAAGTATTCTGCAATTCAGTTCTGAATTCTACTTGGAAGTGCCTATTGCTGTGTTGGTAAGATTGCTTCGTGCTGGCTCAGAGAGCACAGTTATTGGCGCATTAAATGCTCTTCTAGTGTTGGAAAGCGATGATGGGACTAGTGCAGAAGCAATGGCTGAAAGCGGTGCCATAGAGGCTCTCCTAGAGCTTCTAAGATCTCATCAGTGCGAGGAAACTGCTGCTAGACTACTGGAAGTATTGCTAAACAACGTCAAGATTAGAGATTCGAAAGCTACCAGATCAGCCATAGTACCGTTATCCCAGTACCTCTTGGATCCACAAACCCAAGGACAGCAGGCAAGGTTACTGGCAACTTTGGCTCTTGGCGATCTATTTCAGAATGAGAGTCTTGCTCGAACAAGTGATGCAGTTTCAGCATGCCGTGCTTTGGTGAATGTGCTTGAAGATCAACCAACAGAAGAAATGAAAGTTGTAGCCATATGTGCTCTGCAGAACCTTGTGATGCATAGTCGGTCAAATAAAAGAGCAGTTGCTGAGGCTGGTGGTGTACAGGTTGTATTGGATCTGATAGGTTCTAGTGATCCAGACACATCAGTTCAGGCTGCAATGTTCGTTAAACTTCTCTTCTCTAATCATACAATACAAGAATATGCTTCAAGTGAAACAGTCAGAGCAATAACTGCTGCTATTGAAAAGGATTTATGGGCTACTGGAAATGTGAATGATGAGTATCTGAGAGCTTTGAATGCTCTTTTTAGCAACTTCCCACGACTGAGAGCAACTGAGCCAGCAACACTTAGCATTCCCCATCTGGTTACATCATTAAAGACGGGTTCGGAGGCCACTCAAGAAGCTGCCTTGGATGCACTTTTTCTTCTGAGGCAAGCTTGGTCAGCATGCCCAGCAGAAGTCTCAAGATCTCAGTCAATAGCGGCTGCAGATGCTATTCCTTTGCTACAGTACTTAATCCAGTCTGGTCCTCCTCGGTTTCAAGAGAAGGCTGAATTCCTATTGCAGTGTTTGCCCGGCACATTAGTCGTGATCATAAAACGTGGTAACAACATGAAGCAGTCAGTTGGAAACCCAAGTGTTTACTGTAAGCTTACACTTGGCAACACCCCTCCAAGGCAAACGGCGGTGGTCTCAACTGGCCCTAATTCGGAGTGGGATGAGAGCTTTTCATGGTCCTTTGAGAGCCCTCCAAAAGGCCAGAAGCTTCATATTTCTTGCAAAAATAAGAGCAAAGTGGGAAAGAGTTCATTTGGGAAAGTGACAATCCAAATTGATCGCGTGGTAATGCTGGGATCTGTCGCCGGAGAATACACTCTACTGCCGCAAAGTAAAAGTGGTTCCTCGAGGAATTTAGAGATAGAATTCCAGTGGTCTAACAAGACAAGTGATGCCTGTTAG 6468 0.4428 MTTTLAWRFGSSNGGGLAANDMERNGEGNIPDSGPPTPHSVLKMGLRDRSSSMEDPDGTLGSVAQCIEQLRHGSSSAQEKEYSLRQLLELIDMRENAFSAVGSHSQAVPVLVSLLRSGSLSVKIQAATVLGSLCKENELRVKVLLGGCIPPLLGLLKSSSAEGQVAAAKTIYAVSQGGSKDHVGSKIFSTEGVVPALWEQLQKGLKTGNVVDGLLTGALKNLSSNTEGFWNATIQTGGVDILMKLLTSGNPSTLANVCFLLASMMMEDASVCSKVLTSEATKQLLKLLGPGNDAPIRAEAAGALKSLSSQCKEARREISNSNGIPALINATIAPSKEFMQGEHAQALQENAMCALANISGGLSYVISSLGQSLESCTSATHIADTLGALASALMIYDNKAEATRTSDPLVVEQTLLKQFKSQSQFLVKERTIEALASLYGNPVLSIKLANSDAKHLLVGLITMAVNEVQDDLIRALLTLCNNEGSLWRALQGREGVQLLISLLGLSSEQQQECAVALLCLLSNENDESKWAITAAGGIPPLVQILETGSTKAKEDSAKILTNLCNHSEDIRACVESANAVPALLWLLKNGSSNGKEIAAKTLNHLIHKSDTTTISQLTALLTSDLPESKVYVLDALRSMLSVSPLSDIQREGSAASDAIDTMIKLMSSTKEETQAKSASALAGIFEMRKDVRESSVAVKSLLSAMKLLDTESESILIESSRCLAAIFLSIKENKDVAAVARDALLPLVARANSSTLEVAELATCAVANLILDSEISEKAVAEEVIMPATRVLREGTVSGKTHAAAAIARLIHARQVDYSITECVNRAGTVLALVSFLDYSINGSVSTSEAIEALAVLSRLEQNSTHIKPAWAVLAEFPESINPIVLSIADSTPIFQDKAIEILSQLCRDQPVVLGNNVVAASGCLCSLVKRVIGTKNVKVKIGGAALLICAAKVNHQRLVEELNQANLSVDLVQSLVSMLSSALPLSNQSEENKKFISIIINRKEEVNGGKFNTGTAIVSDANLAILLLSILACHDEKCKIAIMEAGAIDILTEKISDSYSQYNQIDYKEDSSMWICALLLAVLFQDRDIIRAHATMKSVPAVASLLKSEELANRYFAAQSIASLVCNGSRGTLLSVANSGAASGLISLLGCADIDIQDLLDLSGEFSLVRYPDQVALERLFRVDDIRGGAASRKAIPALVDLLKPIPDRPGAPFLALGLLTQLARDCPSNKIVMVESGALEALTKYLSLGPQDATEEAATDLLGILFDSAEIRRHEAAFGAVTQLVAVLRLGGRGARYSAARALENLFSADQIRNAETARQAVQPLVEILNTGLEKEQQAAIATLVRLLSENPSRALAVADVEMNAVDVLCRILSSNCSLDLKGDAAELCCVLFGNTRIRSSVAAARCVEPLVSLLVSEFSPAQHSVVRALDRLVDDEQLAELVAAHGAIIPLVGLLYGRNYLLHEAISRALVKLGKDRPACKMEMVKAGVIESILDILHEAPDYLCAAFAELLRILTNNASIAKGQSASKVVEPLFLLLTRQEFGPDGQHSALQVLVNILEHPQCRADYTLTSHQAIEPLIPLLDSPIPAVQQLAAELLSHLLLEEHLQKDPATQQVIGPLIRVLGSGIHILQQRAVKALVSIALIWPNEIAKEGGVVELSKVILHADPSLPHALWESGASVLSSILQFSSEFYLEVPIAVLVRLLRAGSESTVIGALNALLVLESDDGTSAEAMAESGAIEALLELLRSHQCEETAARLLEVLLNNVKIRDSKATRSAIVPLSQYLLDPQTQGQQARLLATLALGDLFQNESLARTSDAVSACRALVNVLEDQPTEEMKVVAICALQNLVMHSRSNKRAVAEAGGVQVVLDLIGSSDPDTSVQAAMFVKLLFSNHTIQEYASSETVRAITAAIEKDLWATGNVNDEYLRALNALFSNFPRLRATEPATLSIPHLVTSLKTGSEATQEAALDALFLLRQAWSACPAEVSRSQSIAAADAIPLLQYLIQSGPPRFQEKAEFLLQCLPGTLVVIIKRGNNMKQSVGNPSVYCKLTLGNTPPRQTAVVSTGPNSEWDESFSWSFESPPKGQKLHISCKNKSKVGKSSFGKVTIQIDRVVMLGSVAGEYTLLPQSKSGSSRNLEIEFQWSNKTSDAC 2155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0596 2155 Gene3D - 408 646 IPR011989 -
Lele23g0596 2155 Gene3D - 48 407 IPR011989 -
Lele23g0596 2155 Gene3D C2 domain 2028 2154 IPR035892 -
Lele23g0596 2155 SMART C2_3c 2030 2126 IPR000008 -
Lele23g0596 2155 SUPERFAMILY ARM repeat 509 862 IPR016024 -
Lele23g0596 2155 CDD C2 2031 2121 - -
Lele23g0596 2155 ProSiteProfiles C2 domain profile. 2010 2127 IPR000008 -
Lele23g0596 2155 Gene3D - 647 795 IPR011989 -
Lele23g0596 2155 SUPERFAMILY ARM repeat 63 266 IPR016024 -
Lele23g0596 2155 Coils Coil 297 317 - -
Lele23g0596 2155 Gene3D - 1396 1693 IPR011989 -
Lele23g0596 2155 Gene3D - 818 1164 IPR011989 -
Lele23g0596 2155 SUPERFAMILY ARM repeat 972 1378 IPR016024 -
Lele23g0596 2155 SUPERFAMILY ARM repeat 1365 1655 IPR016024 -
Lele23g0596 2155 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1195 1239 IPR000225 GO:0005515
Lele23g0596 2155 Pfam C2 domain 2029 2119 IPR000008 -
Lele23g0596 2155 FunFam Protein CELLULOSE SYNTHASE INTERACTIVE 1 2029 2150 - -
Lele23g0596 2155 FunFam Coatomer beta subunit 1615 2028 - -
Lele23g0596 2155 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1824 1867 IPR000225 GO:0005515
Lele23g0596 2155 FunFam Protein CELLULOSE SYNTHASE INTERACTIVE 1 1379 1613 - -
Lele23g0596 2155 SUPERFAMILY ARM repeat 1678 2027 IPR016024 -
Lele23g0596 2155 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 536 578 IPR000225 GO:0005515
Lele23g0596 2155 SUPERFAMILY ARM repeat 218 609 IPR016024 -
Lele23g0596 2155 SMART arm_5 1856 1896 IPR000225 GO:0005515
Lele23g0596 2155 SMART arm_5 1228 1269 IPR000225 GO:0005515
Lele23g0596 2155 SMART arm_5 1397 1437 IPR000225 GO:0005515
Lele23g0596 2155 SMART arm_5 1438 1478 IPR000225 GO:0005515
Lele23g0596 2155 SMART arm_5 136 176 IPR000225 GO:0005515
Lele23g0596 2155 SMART arm_5 1565 1606 IPR000225 GO:0005515
Lele23g0596 2155 SMART arm_5 1310 1351 IPR000225 GO:0005515
Lele23g0596 2155 SMART arm_5 817 859 IPR000225 GO:0005515
Lele23g0596 2155 SMART arm_5 567 607 IPR000225 GO:0005515
Lele23g0596 2155 SMART arm_5 1183 1226 IPR000225 GO:0005515
Lele23g0596 2155 SMART arm_5 94 135 IPR000225 GO:0005515
Lele23g0596 2155 SMART arm_5 311 360 IPR000225 GO:0005515
Lele23g0596 2155 SMART arm_5 525 565 IPR000225 GO:0005515
Lele23g0596 2155 SMART arm_5 1729 1768 IPR000225 GO:0005515
Lele23g0596 2155 SMART arm_5 268 309 IPR000225 GO:0005515
Lele23g0596 2155 SMART arm_5 1480 1520 IPR000225 GO:0005515
Lele23g0596 2155 Pfam Armadillo/beta-catenin-like repeat 525 564 IPR000225 GO:0005515
Lele23g0596 2155 Pfam Armadillo/beta-catenin-like repeat 104 134 IPR000225 GO:0005515
Lele23g0596 2155 MobiDBLite consensus disorder prediction 10 38 - -
Lele23g0596 2155 Gene3D - 1176 1378 IPR011989 -
Lele23g0596 2155 Gene3D - 1797 2027 IPR011989 -
Lele23g0596 2155 Gene3D - 1694 1796 IPR011989 -
Lele23g0596 2155 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 31 2150 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Lele23g0596 2155 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2029 2138 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0596 Lele-ChrLele23 4456494 4466089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0596 457 634 U-box Gene Family AT3G46510 30.435 1.22e-07 55.1