Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0587 ATGGCGGATCGCTCAGACGATTCGCCTCTAATCCCTCCAAAGCTTATCACTGACCCTAGTGAGATCGACCTGGAAGCCGGTCCCAGCGAACAAATCCAATGCCGGATTTGCCTCGAGACTGATGTGATTGCGATGAGAAGTAAAGGGGGACTAATTCAGAATTACTCGCGTTTAGTTGATTCTTTTTTGAAATTCAATGCGTTTTTGCCACACTGCAAGGTTCGTTTGGTTACAAATGTGCCTGCACAACTATATTTTCCTTTACTTGTTCGAAATATTCTTAGTGGGAAGGCTACGGAACTTACAGGAATATTGTTGATATTTGTTTGGGATATTGTGGTTATATATAATTATGCTGCAGATCCTTGTGAGGATGTTGTCTCAAATATTGTAATTAGGATAATTAGAGTGTATTATAGTTATATTAAAGCTATGGCTACAGATCACATGCCAGTGATCTTAGAAGGATTTGCATTTGCTCATTGCACAACCTGCAAGACTCATTATTATTTGCGTGTCCATGTTGCTGCTGATAGGAAATGGCGAACCTTGAAATTTCGCTTCTTTGTCACGAGAGACATTTTGTTTATATTTCTGTCTGTCCAGCTTGTCATTGCTTCACTGGCCTATTTGGTTTATCTAATGGATGGTTACTGGCAATACTGGCTTCATCATATTTGGGGTTTTGATAGGGCTTTATTGTTTTTGGCTTTGCTTGGCCTGTTGGGTTGCTTCATTACTTGTTATGATCGAAGAGTTCGCAATGATTTAGCTCAGCCTTGTCGGGAATTATGTCTTTGTTGTTGTCAACCTGGGTAG 819 0.4029 MADRSDDSPLIPPKLITDPSEIDLEAGPSEQIQCRICLETDVIAMRSKGGLIQNYSRLVDSFLKFNAFLPHCKVRLVTNVPAQLYFPLLVRNILSGKATELTGILLIFVWDIVVIYNYAADPCEDVVSNIVIRIIRVYYSYIKAMATDHMPVILEGFAFAHCTTCKTHYYLRVHVAADRKWRTLKFRFFVTRDILFIFLSVQLVIASLAYLVYLMDGYWQYWLHHIWGFDRALLFLALLGLLGCFITCYDRRVRNDLAQPCRELCLCCCQPG 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0587 272 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 19 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0587 Lele-ChrLele23 4398629 4400597 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0587 1 41 C3H Transcription Factor Family AT2G22120 71.429 5.25e-12 63.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1421 21 22685994 22694061 Lele23g0587 23 4398629 4400597 CCT
Lele22g1413 22 19926547 19933075 Lele23g0587 23 4398629 4400597 CCT
Lele23g0594 23 4436143 4444362 Lele23g0587 23 4398629 4400597 CCT
Lele24g1365 24 19694902 19699520 Lele23g0587 23 4398629 4400597 CCT
Lele23g0587 23 4398629 4400597 Lele23g0587 23 4398629 4400597 ECH
Lele21g1426 21 22723912 22727196 Lele23g0587 23 4398629 4400597 hybridization
Lele22g1418 22 19979104 19982754 Lele23g0587 23 4398629 4400597 hybridization