Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0585 ATGAATTCTCCAATCACTCAGTTTGTTTCCTCAAGAAGGATGGTTGTTTATGATCCAATTCAACAGATTAATATGTGGGGAGAAAATTTCAAAAGTAATGGTAATTTAAGTGCCTTAATTGGTGAAGCAGATGGGAAGTTAATTAATCAGGATGCTTCTCATAACACATTGGGTACGTCCAAGATGTATGGCCAAGAAGCTAATAAACCTACTGATAAGATACAAAGACGTCTTGCACAAAATCGGGAGGCTGCTCGTAAGAGTCGTCAGCGGAAAAAGGCCTATGTGCAGCAATTAGAATCAAGTCGTTTGAAGCTGATCCAGATAGAGCAAGAACTCAACCATGCAAGACAACAGGGTTTATATATGGGCGGGGCATTGGATTCTAATAATCTGGGTTTTCCTGAAACTGTTAATTCAGGCATTACGACCTTCGAGATGGAGTATGGACACTGGGTTGAAGAGCAAAATAGACAAATCTGTGAACTAAGAGGTGCTTTAAATGCTCATATTAGTGACATGGAGCTCAGGATACTTGTAGATAGTATAATGAATCACTATTTCGAACTCTATCGAAAGAAGTCTGCTGCTGCAAAAGCAGATGTTTTCTATGTGATGTTTGGTATGTGGAAAACTACAGCTGAGCGGTTTTTCATGTGGATTGGAGGCTTTTGCCCCTCTAAGCTTCTAAAGGTCATTGTCCCTCTGATTGAACCCTTGACAGAGCAACAACGTTTTGATATCTCTAACCTCGAACAATCTTGCCAGCAAGCAGAAGATGCCCTTTCTCAAGGTATGGATAAACTCCAGCAAACACTTGGCGATACGATAGCAGCTGGACCACTAGTTGAAGGAACTTATATTCCTCAGATGGCTGCTGCTATGGAGAGAATGGAAGCTCTCGTGAGCTTTGTAAACCAGGCTGATCATCTTCGTCAGGAAACCTTGCAGCAAATGTTTCGTATCCTAACGATCCGTCAGGCTGCTCGATACTTGCTTACTCTAGGCGAATATTTCCAACGCCTACGATCCTTGAGCTCACTTTTGGCGAATCGTCCTCGGGAACCAGCTTAG 1074 0.4236 MNSPITQFVSSRRMVVYDPIQQINMWGENFKSNGNLSALIGEADGKLINQDASHNTLGTSKMYGQEANKPTDKIQRRLAQNREAARKSRQRKKAYVQQLESSRLKLIQIEQELNHARQQGLYMGGALDSNNLGFPETVNSGITTFEMEYGHWVEEQNRQICELRGALNAHISDMELRILVDSIMNHYFELYRKKSAAAKADVFYVMFGMWKTTAERFFMWIGGFCPSKLLKVIVPLIEPLTEQQRFDISNLEQSCQQAEDALSQGMDKLQQTLGDTIAAGPLVEGTYIPQMAAAMERMEALVSFVNQADHLRQETLQQMFRILTIRQAARYLLTLGEYFQRLRSLSSLLANRPREPA 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0585 357 FunFam BZIP family transcription factor 72 121 - -
Lele23g0585 357 ProSiteProfiles DOG1 domain profile. 142 352 IPR025422 GO:0006351|GO:0043565
Lele23g0585 357 Pfam Seed dormancy control 159 234 IPR025422 GO:0006351|GO:0043565
Lele23g0585 357 SMART brlzneu 69 129 IPR004827 GO:0003700|GO:0006355
Lele23g0585 357 SUPERFAMILY Leucine zipper domain 73 115 IPR046347 GO:0003700|GO:0006355
Lele23g0585 357 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 71 113 IPR004827 GO:0003700|GO:0006355
Lele23g0585 357 Pfam bZIP transcription factor 71 101 IPR004827 GO:0003700|GO:0006355
Lele23g0585 357 Coils Coil 248 268 - -
Lele23g0585 357 Gene3D - 72 121 - -
Lele23g0585 357 Coils Coil 92 119 - -
Lele23g0585 357 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 76 91 IPR004827 GO:0003700|GO:0006355
Lele23g0585 357 PANTHER TRANSCRIPTION FACTOR TGA9 1 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0585 Lele-ChrLele23 4377367 4381201 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0585 1 357 Calmodulin-binding Proteins AT5G65210 66.304 2.46e-178 497
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele23g0585 DOG1 1.5e-29 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0585 23 4377367 4381201 Lele23g0585 23 4377367 4381201 ECH
Lele23g0585 23 4377367 4381201 Lele24g1372 24 19771876 19776543 ECH
Lele21g1429 21 22755560 22759468 Lele23g0585 23 4377367 4381201 hybridization
Lele22g1420 22 19998679 20003334 Lele23g0585 23 4377367 4381201 hybridization