Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0570 ATGGACTTGACGGCGAAGCTTCATCACCTTGAACTCAGTTCAAGCTTCCTCACCGGTACCGTCATCTTGGACACACGGAAAGCCGCTGTACGACCTTACATTCTGCCAGCTTCAAATCGTGTGGTTTCTCAAACCCTTAGAGGTAATGCTAATTTAGTTGAACCCACTCAATTTATTGGTCCTAGAAGAGCGAATTTTAGTATCGCTGCTAGTTCATCTGCGGTTGCCGTCGAGACATCGGCGGCAGAATCCACTACCGAAGAGGACATTGAGTCTTTGTTTTCGAACTCTTCGGTTGATGAATTTGAGAAAAAACGTGTGAATAAGCAACAGAATACCGGTGCGTCGAGCATTTCATCTGGTGTCAAGTTAGAGAATGTGAGCAAAAGCTACAAGGGCGCCATTGTCTTGAAAGATGTTAGTTGGGAAGTGAAAAAGGGTGAAAAAGTGGGATTGGTTGGTGTAAATGGTGCAGGGAAGACGACACAGATGAGAATTATTGCTGGTCAGGAAGAGCCAGATTCGGGGAATGTAATAAAAGCCAAACCAAATATGAAAATTGCTTTTCTGAGTCAGGAATTTGAGGTATCTCTGAGTAGGACCGTGAGGGAGGAATTTCTAAATGCATTTAAGGAGGAGATGGAGATAGCAGGGAAGTTGGAGAGGGTGCAGAGGGCACTCGAGGGTGTTGTGAACGATTTAGAATTGATGGGGAGGCTTTTAGATGAGTTTGATTTGCTTCAGAAGAAGGCCCAGGCAGTGAACTTGGATGTAGTAGATGCGAAGGTAAGCAAATTGATGCCAGAACTTGGGTTTTCTCCCGATGATTCAGACAGGCTGGTGGCGTCATTTAGTAGTGGATGGCAGATGAGGATGTCCCTGGGAAAGATTTTACTTCAGGAGCCAGATTTATTACTGTTGGATGAACCAACAAATCACCTTGACCTTGACACGATTGAGTGGCTTGAAGGGTATCTTAACAAGCAAGATGTGCCTATGGTTATCATTTCCCATGACAGAGCTTTCCTTGATCAACTGTGTACAAAAATCGTGGAAACTGACATGGGCATATCCAGAACATATGAGGGCAATTATTCCCAGTATGTAATTTCGAAGGCAGCATGGATTGAAGCACAGTATACTGCATGGGAGAAGCAGCAGAAAGAAATTGAGCAGACAAAGGACTTAATAAACAGGTTAGGTGCTGGAGTGAATTCTGGCCGGGCTTCTTCTGCCGAGAAGAAGCTGGAGAAGCTTCAAGAAGAGGAACTAGTAGAGAAGCCATTTCAACGGAAACAAATGAAAATCAGGTTCCCTGAGCGTGGAAGAAGTGGAAGATCCGTTGTAACCATTAAGAACTTGGAATTTGGCTTTGAGGATAAAGTGCTCTTCGAAAAGGCAAATCTTACAATTGAAAGGGGAGAAAAAATTGCCATTATTGGTCCAAATGGATGTGGCAAGAGTACTTTGCTGAAGCTCATAATGGGTTTAGAGAAGCCAAATGTGGGTGAAGTTGTGCTTGGGGAGCATAATGTATTGCCTAACTATTTTGAGCAAAATCAGGCTGAGGCACTTGATCTGGAGAAGACAGTGCTTGAGACAATAGAAGAAGCTGCTGAGGACTGGAAGATTGATGATATTAAAGGACTTCTTGGGCGTTGTAATTTCAAATCTGATATGCTTGATCGGAAAGTTTCCCTATTGAGTGGTGGTGAGAAGGCACGTCTGGCTTTTTGCAAATTTATGGTAACACCATCATCTCTGCTGGTGTTGGATGAACCAACCAATCACTTGGATATACCTTCTAAAGAAATGCTTGAGGAGGCAATAAATGAGTACCAGGGCACTGTTATTACGGTGTCTCATGATCGATACTTCATAAAGCAGATAGTCAATAGAGTCATAGAAGTTAAAGATGGAACTATACAGGATTATGCTGGTGACTATAATTACTATTTAGAAAAGAATCTTGATGCTAGAGCTAAAGAGCTTGAACGTGAGGCAGAGCTTGAAGAGAAAGCTCCAAAAGTGAAAGCCAAATCCAAGATGTCAAAGGCTGAGAAAGAAGCACGGAAGAAACAGAAGATGCAAGCTTTTCAGGCAGCAAAGCAGAAGTCTAAAGGATCTAAAAATTCAAAGAGATGGAATTGA 2151 0.4282 MDLTAKLHHLELSSSFLTGTVILDTRKAAVRPYILPASNRVVSQTLRGNANLVEPTQFIGPRRANFSIAASSSAVAVETSAAESTTEEDIESLFSNSSVDEFEKKRVNKQQNTGASSISSGVKLENVSKSYKGAIVLKDVSWEVKKGEKVGLVGVNGAGKTTQMRIIAGQEEPDSGNVIKAKPNMKIAFLSQEFEVSLSRTVREEFLNAFKEEMEIAGKLERVQRALEGVVNDLELMGRLLDEFDLLQKKAQAVNLDVVDAKVSKLMPELGFSPDDSDRLVASFSSGWQMRMSLGKILLQEPDLLLLDEPTNHLDLDTIEWLEGYLNKQDVPMVIISHDRAFLDQLCTKIVETDMGISRTYEGNYSQYVISKAAWIEAQYTAWEKQQKEIEQTKDLINRLGAGVNSGRASSAEKKLEKLQEEELVEKPFQRKQMKIRFPERGRSGRSVVTIKNLEFGFEDKVLFEKANLTIERGEKIAIIGPNGCGKSTLLKLIMGLEKPNVGEVVLGEHNVLPNYFEQNQAEALDLEKTVLETIEEAAEDWKIDDIKGLLGRCNFKSDMLDRKVSLLSGGEKARLAFCKFMVTPSSLLVLDEPTNHLDIPSKEMLEEAINEYQGTVITVSHDRYFIKQIVNRVIEVKDGTIQDYAGDYNYYLEKNLDARAKELEREAELEEKAPKVKAKSKMSKAEKEARKKQKMQAFQAAKQKSKGSKNSKRWN 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0570 716 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 122 380 IPR003439 GO:0005524
Lele23g0570 716 SMART AAA_5 146 356 IPR003593 -
Lele23g0570 716 SMART AAA_5 473 641 IPR003593 -
Lele23g0570 716 MobiDBLite consensus disorder prediction 668 716 - -
Lele23g0570 716 ProSitePatterns ABC transporters family signature. 284 298 IPR017871 GO:0005524|GO:0016887
Lele23g0570 716 Pfam ABC transporter 466 596 IPR003439 GO:0005524
Lele23g0570 716 CDD ABCF_EF-3 449 641 - -
Lele23g0570 716 MobiDBLite consensus disorder prediction 668 696 - -
Lele23g0570 716 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 449 664 IPR003439 GO:0005524
Lele23g0570 716 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 429 655 IPR027417 -
Lele23g0570 716 Gene3D - 118 402 IPR027417 -
Lele23g0570 716 Pfam ABC transporter 351 438 IPR032781 -
Lele23g0570 716 Gene3D - 411 679 IPR027417 -
Lele23g0570 716 PANTHER ABC TRANSPORTER ATP-BINDING SUBUNIT 121 707 - -
Lele23g0570 716 Pfam ABC transporter 137 312 IPR003439 GO:0005524
Lele23g0570 716 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 123 364 IPR027417 -
Lele23g0570 716 Coils Coil 654 674 - -
Lele23g0570 716 CDD ABCF_EF-3 122 352 - -
Lele23g0570 716 ProSitePatterns ABC transporters family signature. 568 582 IPR017871 GO:0005524|GO:0016887
Lele23g0570 716 Coils Coil 676 705 - -
Lele23g0570 716 FunFam Putative ABC transporter ATP-binding component 123 407 - -
Lele23g0570 716 FunFam ABC transporter ATP-binding protein 409 678 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0570 Lele-ChrLele23 4210830 4220900 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0570 446 666 Calmodulin-binding Proteins AT2G36910 25.911 2.79e-13 72.0