LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele23g0566	ATGAACTACTGCTACTTTGAAAACCCTAATCCAAACCCTAATTATGGCGTGAACATGATGGAGATGGTGGATTCGCCATCTGAGTACATATTATCCGATTACCTCATGTTCGAAGATGATGATGATCATCATCCTCAAGAATATTGGTCACACAGCACAGAATCATCGGAGAAGACGAACACTGAGATTAGTACTGGTGCAACATCGGACGGCTACAACATGCAAGTGCTTATAGAATGCAAAAATGGTGGGGTAAAGAGAAACAAAGAAGAAGTGAGTCAGAGGGTTGCGTTTAAGACAAGATCGGAGCTTGATGTTATGGATGATGGATACAAATGGAGGAAATATGGAAAGAAGTCTGTGAAGAGTAATCCAAATCCCAGGAACTACTACAAGTGTGCAAATGGAGGATGCAAAGTGAAGAAGAGAGTAGAAAGGGATACAGAGGATGTGAGCTATGTGATCACAACTTATGATGGAGTTCACAATCATGAGAGCCCCTCTTCTGCCTACTATTCCCAAATGCTTCATATTCCTAATTACAATTTCCATTCCTCTACTTCTGCTAACTCATCCTCCACTACTACTTCTTAG	594	0.4108	MNYCYFENPNPNPNYGVNMMEMVDSPSEYILSDYLMFEDDDDHHPQEYWSHSTESSEKTNTEISTGATSDGYNMQVLIECKNGGVKRNKEEVSQRVAFKTRSELDVMDDGYKWRKYGKKSVKSNPNPRNYYKCANGGCKVKKRVERDTEDVSYVITTYDGVHNHESPSSAYYSQMLHIPNYNFHSSTSANSSSTTTS	197

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele23g0566	197	SUPERFAMILY	WRKY DNA-binding domain	100	167	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Lele23g0566	197	ProSiteProfiles	WRKY domain profile.	102	167	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Lele23g0566	197	MobiDBLite	consensus disorder prediction	45	68	-	-
	Lele23g0566	197	FunFam	WRKY transcription factor 57	93	167	-	-
	Lele23g0566	197	Pfam	WRKY DNA -binding domain	108	165	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Lele23g0566	197	Gene3D	WRKY domain	94	160	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Lele23g0566	197	PANTHER	WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED	53	191	IPR044810	GO:0003700
	Lele23g0566	197	MobiDBLite	consensus disorder prediction	52	68	-	-
	Lele23g0566	197	SMART	WRKY_cls	107	166	IPR003657	GO:0003700\|GO:0006355\|GO:0043565

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele23g0566	Lele-ChrLele23	4191620	4195518	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele23g0566	79	176	WRKY Transcription Factor Family	AT5G64810	65.000	2.81e-42	139

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Lele23g0566		WRKY	3.8e-22	CL0274