Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0556 ATGGATTCAATGTCAACGACGTCGTCTCAGGCGATTATGAACCAGAGCTTGTTTTATCATCATCAGCAGGATCAGATGGGGCTGCTTTCTTCTTTCCCTATTAACCTGGGCTTCAATAATTTTCCAGCTTCTTCTATGGGTCATCAATTACCAGCTTTGAAATCCTTCAGCGACTTATCTGCTTCAGCTCCTTCATCACTTGCAATATCTGAAGTAGTTTCTTCTGCAACTCCAAATCTAACGCCTGAAACCCATATCTCTTTCACACCTTATCATAAGCCAATCAGAGAAGACATCACTCAACTCCTTTCCCTCCATAGATCCACTCTAATTAATCCAAGGGCATGGGGACCAGGAGAGAGTGAGTGTAAGAGATCAAGTGAAGGAGAAGTTCATCATCATCATCATCACGAACTACTTGGGGTTTCAGCGATGAAGATGAAGAGATCAATGAAGGGAAGAAGGAAGGTGAGAGAACCCAGGTTTTGCTTCAAGACACTCAGCGATGTCGATGTCTTGGACGATGGCTATAAGTGGAGGAAGTACGGCCAAAAAGTCGTCAAGAACACTCATCTTCCCAGGAGCTACTATCGGTGCACACAAGACAACTGTAGGGTGAAGAAGAGGGTAGAGAGGCTAGCAGAGGATCCGAGGATGGTGATAACAACGTACGAAGGGAGGCATGCTCATTCACCTTCCAACGATCCTGAAGATTCTCACACTCATTCTTCTCAGCTTACCAGTTTTTTGTGGTAG 756 0.4484 MDSMSTTSSQAIMNQSLFYHHQQDQMGLLSSFPINLGFNNFPASSMGHQLPALKSFSDLSASAPSSLAISEVVSSATPNLTPETHISFTPYHKPIREDITQLLSLHRSTLINPRAWGPGESECKRSSEGEVHHHHHHELLGVSAMKMKRSMKGRRKVREPRFCFKTLSDVDVLDDGYKWRKYGQKVVKNTHLPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHAHSPSNDPEDSHTHSSQLTSFLW 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0556 251 SMART WRKY_cls 173 232 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele23g0556 251 MobiDBLite consensus disorder prediction 227 251 - -
Lele23g0556 251 Pfam WRKY DNA -binding domain 174 230 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele23g0556 251 ProSiteProfiles WRKY domain profile. 168 233 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele23g0556 251 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 129 236 IPR044810 GO:0003700
Lele23g0556 251 MobiDBLite consensus disorder prediction 118 137 - -
Lele23g0556 251 SUPERFAMILY WRKY DNA-binding domain 166 232 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele23g0556 251 MobiDBLite consensus disorder prediction 121 137 - -
Lele23g0556 251 FunFam WRKY transcription factor 57 159 233 - -
Lele23g0556 251 Gene3D WRKY domain 160 226 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0556 Lele-ChrLele23 4097745 4100095 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0556 134 251 WRKY Transcription Factor Family AT4G39410 68.889 6.96e-56 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele23g0556 WRKY 2.4e-24 CL0274