Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0533 ATGCTACAGAATTCGAGTTCACCTGAAAGCTCCATTCACCACCGGAGTCACCCAGAGGAGGGTGGTGGTAAGCCTGTTTCTGATGGACTCCAAAACGAACAGGTAATAGTCTCAGCCGAAGATGTTGACCGGAATCTCACCGGTGGCCGGTGGCCTCTAGAAGAGACTAAGGCTTTGCTCAAGATAAGGAGATTAGGGGAGCTAGGCTATAATAGGAGCGCTAAGAAATGCCAGGAGAAGTTTGAAAATGTGTACAAGTACTACAGAAGAACCAAGGAAGGTCGTTATGGCCGATCCAACGCCAAGACTTACCGATTCTTTGAGCTGTTAGAACCTCTTATGAACTCTCCTTACCCCGAAACGAATGGAGAACAAGCGAGAAACACAGCAACAACCACAACCCCGATGGATTTGTCCAATGTTATTCAATGTGCAATTCAACATCCTTACCCCGAAAAGAATGAAGAACAAGTGGAAAACATAGCAACAACTACAACCCCAATGGATTTGTCCAATGTTATTCAAGATTCAATTCCATATTCCATTCGATTCTCTGGTGACCCCTCTGGTTCAGCTACTTCCTCTTCGAGCGAAGAATCAGATGAAGATATTCGAAAGAAGAAAAGGAAATTGACGCAGTATTTTGAGACCTTGATGAATAAAGTCCTAGAGAAGCAAACGAAGCTACAGAAGAGCTTTATGGAGAGTTTACTCAAATGTGAACAAGATAGAATGGTAAGAGAGGAAGCATGGAAGATGCAAGAATTGGCTAGGATTAAGAGGGAAAGAGATATTTTGGCTCAAGAAAGGTCAATTGCCGCGGCAAAAGATGCTGCAGTGCTTGCCCTTCTGAGAAAGTTCGCAGGACAAACAGTGACCATAGAATTACCTGAGGACCTACTTCCAAATGATTTAGATAAGGACGAGCAAGAAAATGATAATGCAGGCAGTAGTGTTATTGAAAAGCAAGAATTTAGAAATGGTGGGAATTTCACACTGACGAGTCCATCTTTCTGTAGATGGCCCAAAGATGAAGTGGAAGCTTTGATTAGAGTGAGGATAAACTTTGATGGGGAGAATGAAGGAAATGGGCTTAAAGGGTCTATTCCTATATGGGAGGAGATATCTAGTGAAATGAAAAAACTTGGGTACGATCGGAGTGCCAGGAGATGCAAAGAGAAATGGGAGAATATGAACAAATACTTCAAGAGGATGAAGAATAAAAACCAGAAAAAGCCTCAGAGTTCTAAAACATGTCCTTATTTTCACCAGCTGGATGCTCTGTACAATAGTGAAAAGCCTAATGATGAGAAGGTGGAGGATTCAGCCAGTTCTGATAAGGATCAACTGAAGCCTGAGGAGCTACTAATGCATCTTATGGAGGGTCAGTCTCAGTCATCATCAGAGGATGCTGACAGAGAAGAAGGATCAGAATAA 1437 0.4259 MLQNSSSPESSIHHRSHPEEGGGKPVSDGLQNEQVIVSAEDVDRNLTGGRWPLEETKALLKIRRLGELGYNRSAKKCQEKFENVYKYYRRTKEGRYGRSNAKTYRFFELLEPLMNSPYPETNGEQARNTATTTTPMDLSNVIQCAIQHPYPEKNEEQVENIATTTTPMDLSNVIQDSIPYSIRFSGDPSGSATSSSSEESDEDIRKKKRKLTQYFETLMNKVLEKQTKLQKSFMESLLKCEQDRMVREEAWKMQELARIKRERDILAQERSIAAAKDAAVLALLRKFAGQTVTIELPEDLLPNDLDKDEQENDNAGSSVIEKQEFRNGGNFTLTSPSFCRWPKDEVEALIRVRINFDGENEGNGLKGSIPIWEEISSEMKKLGYDRSARRCKEKWENMNKYFKRMKNKNQKKPQSSKTCPYFHQLDALYNSEKPNDEKVEDSASSDKDQLKPEELLMHLMEGQSQSSSEDADREEGSE 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0533 478 MobiDBLite consensus disorder prediction 302 321 - -
Lele23g0533 478 MobiDBLite consensus disorder prediction 1 29 - -
Lele23g0533 478 FunFam Trihelix transcription factor GT-2 341 404 - -
Lele23g0533 478 MobiDBLite consensus disorder prediction 430 455 - -
Lele23g0533 478 Pfam Myb/SANT-like DNA-binding domain 340 428 IPR044822 -
Lele23g0533 478 Pfam Myb/SANT-like DNA-binding domain 65 111 IPR044822 -
Lele23g0533 478 CDD GT1 340 406 - -
Lele23g0533 478 PANTHER FI21293P1 10 468 - -
Lele23g0533 478 MobiDBLite consensus disorder prediction 184 205 - -
Lele23g0533 478 Gene3D - 341 404 - -
Lele23g0533 478 Gene3D - 62 90 - -
Lele23g0533 478 ProSiteProfiles Myb-like domain profile. 340 399 IPR001005 -
Lele23g0533 478 SMART sant 47 87 IPR001005 -
Lele23g0533 478 SMART sant 337 401 IPR001005 -
Lele23g0533 478 MobiDBLite consensus disorder prediction 430 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0533 Lele-ChrLele23 3918830 3920668 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0533 48 430 Trihelix Transcription Factor Family AT1G76890 40.397 3.27e-93 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele23g0533 Myb_DNA-bind_4 2.1e-20 CL0123