Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0521 ATGAATGCGATTTTCGAGTTCGGCCGATGCAATTATCGTACATTGTATCGTAGGAAGCACAAGAAGTTTGACATGAAGGCTGTCAAAATATGGGCAAGACAGATTTTTGTAGGTTTAAGTCACAACCCACCTATTATACATAGGGATCTGAATTGTTATAATATATTTATCAATGGAAACCAAGGTGAAGTTAAAATTGGCGATCTGGGGCTCACAACTTTCTTGGAACGGGCTAATGCTGAGAGTGTAATTGATATTGTTATCCCTAGATGTGGAGCCTTTGGAGAACATATTCTTGTGTCAGAAGGTCCTGCTACTCAACGTAATGGATCAAATTCTTTGGATCTTGATGAGACTTGTGAATTACCTATGATCACTATATATGATAGTTCTGGGGATGCTCCACGTTTTCCATGTGTCGAGATACGAAGCCCCAAGAGAGGTCAAGTGAGAAATATTCACTTCCTATTCTACCTTGATAGTGATACTGCTATTTCTGTTTCTAGTGAGATTGTTGAGCAATTGGAACTTCCGGATCAAAATGTAAAATTCATAGCCGAGCTGATGGACTTGTTATTGGTTAATCTGGTTCCTAATTGGAAACCTTGTGTAGATATTGCTCATTTGGCTTTACGAAGTTGTAAAAGAACTATTGGTGGACAAAAAGATTTAGAATCTGCAAAACAAAAACAACCCTGTGAAGATTCCATGGATAATATTACTAAAGAGAAAGGCATCTTGCCCCTGATTAAAAGCTCAAGTGTATTAGAAAACTATCATCGCCCTAATTTGGATGAATTTTTATCTCATGCCAACATAGATCGAAATATAATTAGAATAGATAATTTGTGTTCTGAAATTTTACATGTTTCTAGAACATCTGACATTAGCGATAAGAAGTTATCTTTAGTTTCACTCTTATCTGCGGATTCTGCATTTCATGACTTCAACTTGCCTAGAGTATCAGTAGGAACTGAATGCTCTTTTGTATCCATAATGAAAGCATGTCCTGATTATCATAGGAGTAAGACTTCAGAATTAGGGAGTCATGATATGTTGAACTGCCCGACCCATTCTTGTACTTTTTCTTCTCTATCTATGGTAGAGGATGAGTTGAAAATAGAGTTAGATATGATTGAACAAAAATACCTAGAGACAATTAAAGAAGCATAA 1173 0.3632 MNAIFEFGRCNYRTLYRRKHKKFDMKAVKIWARQIFVGLSHNPPIIHRDLNCYNIFINGNQGEVKIGDLGLTTFLERANAESVIDIVIPRCGAFGEHILVSEGPATQRNGSNSLDLDETCELPMITIYDSSGDAPRFPCVEIRSPKRGQVRNIHFLFYLDSDTAISVSSEIVEQLELPDQNVKFIAELMDLLLVNLVPNWKPCVDIAHLALRSCKRTIGGQKDLESAKQKQPCEDSMDNITKEKGILPLIKSSSVLENYHRPNLDEFLSHANIDRNIIRIDNLCSEILHVSRTSDISDKKLSLVSLLSADSAFHDFNLPRVSVGTECSFVSIMKACPDYHRSKTSELGSHDMLNCPTHSCTFSSLSMVEDELKIELDMIEQKYLETIKEA 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0521 390 ProSiteProfiles Protein kinase domain profile. 1 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g0521 390 SUPERFAMILY Protein kinase-like (PK-like) 13 78 IPR011009 -
Lele23g0521 390 Gene3D Transferase(Phosphotransferase) domain 1 1 89 - -
Lele23g0521 390 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 142 221 - -
Lele23g0521 390 Pfam Protein kinase domain 5 79 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0521 Lele-ChrLele23 3854578 3857186 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0521 1 209 MAP Kinase Kinase Kinase AT3G18750 45.552 3.85e-67 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lele23g0521 Pkinase 1.1e-10 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1491 21 23206455 23208944 Lele23g0521 23 3854578 3857186 hybridization
Lele22g1479 22 20551009 20553971 Lele23g0521 23 3854578 3857186 hybridization