Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0510 ATGACCAGTCCTCCCAGGAATTCACATTCCTTCTTCTGTCTTCCGAAATCTTCTTTCCTTCTCTTTTCCATGGCTTCTCTCCTTTCCCTCTCCCTTCTCTCCTTCTTCCTCTTCCTTTCTCTCTCCTCCGCCGCTCGCCACCACCGGAAACCACCCACCACCACCCCCTCTACCTCCTCCCCTGTTGTCGTCCAGAACGCCTGCAAGGCGACGCGCTTCCCTGAACAATGCCAATCTTCTCTCACCAAACTCCCTCCCGATCCCACTCCAGTTCAAATCCTCCAATCCGCCTTGTCCGTGTCGTCGGAGAATCTCAAGACGGCGCAATCCATGGTTAAGTCCATCCTCGACTCATCGGCTTCCAGTATCAACCGCACCACCGCTTGCAAGGTCTGCATGGAGGTGCTCTCTGACTCCAATTACCGCATCGGTCTGGCCAATGATGCGCTGCCGCGTGGCAGGACCAAGGACGCTCGCGCATGGATGAGCGCCGCCCTGCTCTACCAGTACGATTGCTGGTCCGCTTTGAAGTACGCCAACGACACTCGCCAGGTCGGGGAGGCGATGGCCTTCTTGGACTCACTCACCAGGATCTCCAGCAACGCTTTGAGCATGATAGCGTCGTACGACGTCGTTGGGAATGACACTGCGTCGTGGAGGCCACCATTAACGGAGCGTGATGGGTTCTGGGAAGGATCTGGGTCGGGTTCTGGGTCGTTGGGTTTCAGGGGTGGGTTTCCGGCGAAAGTGAAGCCGGATGTTACAGTGTGTAAGGATGGAGGGAATGGGTGTTACAAGACGGTGCAGGAGGCTATTAACGCTGCTCCGGATAACGCCGGCGACAAGAAATTTGTGATATACATAAAGGAAGGTGTTTTTGAAGAGACTGTTAGGGTTCCGTTGGAGAAGAAGAATGTGGTGTTTTATGGTGACGGAATAGGGAAGACCATCATCACAGGGTCTGCTCAAGCGGATCAACCCGGAATGACGACGTACCTTTCAGCTACCGTTGCTGTTCTGGGTGATGGATTCATGGCCAAGGGTCTCACAATCCAGAACACAGCAGGCCCTGTTGCTCATCAAGCAGTGGCCTTAAGATCAGACAGCGATTTCTCTGTGTTTGAAGAATGCGAATTCATAGGCAATCAAGACACACTCTATGCTCATTCCCTTCGCCAATTCTACAAATCATGCCGCATCCTTGGCAACGTAGACTTCATCTTTGGCAACTCCGCTTCCATCTTCCAAGATTGCCAAATCCTAGTCCGGCCCCGGCAAGTGAAGCCGGAGAGTGGCGAGAACAATGCAGTCACTGCACATGGCAGAACAGACCCAGCTCAAACCACTGGCTTTGTTTTTATGAACTGCTTGATCAACGGGACTAAGGAGTACATGGATTTGTACCATAGCAAGCCTCAGAAGCACAAGAACTACTTGGGGAGGCCATGGAAGGAGTACTCAAGAACAGTGTTCATTAAATCATTCTTAGAAGCTCTCATAACTCCCACCGGGTGGATGCCATGGGGTGGTGAATTTGCACTAAAGACACTTTACTATGGAGAGTATGCCAACACAGGACCTGGTTCTGATCTGAGTCAGAGAGTTCCATGGAGCAGCAAGGTCCCACCTGAACACTTGTCTGCATATTCAATTCAGAATTTCATCCAAGGAGATGAGTGGATTCCATCATCCATGATTAGCGCTTTAGATTTGTCATAG 1719 0.5166 MTSPPRNSHSFFCLPKSSFLLFSMASLLSLSLLSFFLFLSLSSAARHHRKPPTTTPSTSSPVVVQNACKATRFPEQCQSSLTKLPPDPTPVQILQSALSVSSENLKTAQSMVKSILDSSASSINRTTACKVCMEVLSDSNYRIGLANDALPRGRTKDARAWMSAALLYQYDCWSALKYANDTRQVGEAMAFLDSLTRISSNALSMIASYDVVGNDTASWRPPLTERDGFWEGSGSGSGSLGFRGGFPAKVKPDVTVCKDGGNGCYKTVQEAINAAPDNAGDKKFVIYIKEGVFEETVRVPLEKKNVVFYGDGIGKTIITGSAQADQPGMTTYLSATVAVLGDGFMAKGLTIQNTAGPVAHQAVALRSDSDFSVFEECEFIGNQDTLYAHSLRQFYKSCRILGNVDFIFGNSASIFQDCQILVRPRQVKPESGENNAVTAHGRTDPAQTTGFVFMNCLINGTKEYMDLYHSKPQKHKNYLGRPWKEYSRTVFIKSFLEALITPTGWMPWGGEFALKTLYYGEYANTGPGSDLSQRVPWSSKVPPEHLSAYSIQNFIQGDEWIPSSMISALDLS 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0510 572 Gene3D - 247 569 IPR012334 -
Lele23g0510 572 TIGRFAM PME_inhib: pectinesterase inhibitor domain 29 207 IPR006501 GO:0004857
Lele23g0510 572 CDD PMEI-like_3 67 210 - -
Lele23g0510 572 PANTHER PECTINESTERASE 38 562 - -
Lele23g0510 572 FunFam Probable pectinesterase/pectinesterase inhibitor 51 62 208 - -
Lele23g0510 572 Pfam Pectinesterase 253 558 IPR000070 GO:0030599|GO:0042545
Lele23g0510 572 Pfam Plant invertase/pectin methylesterase inhibitor 64 205 IPR006501 GO:0004857
Lele23g0510 572 FunFam Pectinesterase 247 570 - -
Lele23g0510 572 SMART PMEI_2 59 205 IPR006501 GO:0004857
Lele23g0510 572 Gene3D Invertase/pectin methylesterase inhibitor family protein 62 209 IPR035513 -
Lele23g0510 572 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 64 206 IPR035513 -
Lele23g0510 572 SUPERFAMILY Pectin lyase-like 250 566 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0510 Lele-ChrLele23 3744717 3746937 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0510 56 560 Carbohydrate Esterase AT5G09760 66.145 0.0 720