Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0509 ATGCCAAACGAAGTCGTTTCTTGGCGAACTTGGCGTTCTCCTTCTCAATACTCTCGGCAGTGGTTGTTTCTCGCCGTCTCCGTCGAGTGCTTTTTCTTCAGGCCGATCTGGACCACTGGTCAAAACCTCAGACCTGAGACTTATGCTAGGCTAGGTCAGCCCAGTCCGGCCTGTGCACAGCCCTGGGAAGCAGTGGTGGTGTCATCTCTTCTAGGATCGACCTCTTCCGTTATAACTGTTGGGCCTTGCAACAACGAATTATGCAAAATGTTTGGTGTGCGTGGTTCTACCGGAATTGTTTCTGAAGTCGTTTACCAGCTTCGTCAAACTTTATCACTTCATGGTGTACGAGCACAATATATAAACATTGGAGGTGGTGTTGGAGGGGAGATCCCTGACAACAAGCGCCTTCAGTATGCCCTGCAGCACATACATGGAATTGGCCGTTCCAAAGCTCACCATATTGTCTGTGAGCTGGGGGTTGAGAACAAATATGTCAAGGACCTAAGTAAGAGAGAATTATATTCCCTTCGAGAACTACTTTCCAAGTACTTGCTCGGAAATGACTTGAAAAGATGTGTTGAGAAAGATATAGAAAGGTTGGTGAGTATTCAGTGTTACAGGGGTTTCAGACATGTGGATGGGTTACCCTGCAGAGGACAACGCACACATACAAATGCTCGTACCAGGAAGAGCAGGCCGGGTTTTGCTGCATCAAGATCTGCTCACTAG 732 0.4768 MPNEVVSWRTWRSPSQYSRQWLFLAVSVECFFFRPIWTTGQNLRPETYARLGQPSPACAQPWEAVVVSSLLGSTSSVITVGPCNNELCKMFGVRGSTGIVSEVVYQLRQTLSLHGVRAQYINIGGGVGGEIPDNKRLQYALQHIHGIGRSKAHHIVCELGVENKYVKDLSKRELYSLRELLSKYLLGNDLKRCVEKDIERLVSIQCYRGFRHVDGLPCRGQRTHTNARTRKSRPGFAASRSAH 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0509 243 ProSiteProfiles Ribosomal protein S13 family profile. 127 232 IPR001892 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Lele23g0509 243 Gene3D 30s ribosomal protein s13, domain 2 192 231 IPR027437 -
Lele23g0509 243 MobiDBLite consensus disorder prediction 219 243 - -
Lele23g0509 243 FunFam 30S ribosomal protein S13 127 192 - -
Lele23g0509 243 PANTHER 30S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18 115 231 - -
Lele23g0509 243 Gene3D - 127 191 - -
Lele23g0509 243 Pfam Ribosomal protein S13/S18 128 229 IPR001892 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Lele23g0509 243 ProSitePatterns Ribosomal protein S13 signature. 208 221 IPR018269 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Lele23g0509 243 FunFam Ribosomal protein S13 192 231 - -
Lele23g0509 243 SUPERFAMILY S13-like H2TH domain 128 232 IPR010979 GO:0003676
Lele23g0509 243 Hamap 30S ribosomal protein S13 [rpsM]. 120 239 IPR001892 GO:0003723|GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0509 Lele-ChrLele23 3738833 3741911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0509 131 232 Cytoplasmic Ribosomal Protein Gene Family AT4G09800 29.365 1.17e-06 45.4