Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0508 ATGAATACCAACCAGAATCCCAATATTCATCCCTCTTTCACCACTAGTATTAACAACAACAACAACAATAATAATCATCCCACTTGGAATATGGCTTCTACTTGGCCGATTTCTTCGACTTCGCCTTCTTCATCTTCAGGTTTTCTCTTCAGTGGCATGTTTGGCATCAACTTGGAACGAGAAGGAGAAGAAGAGGGGGAAGAAGAAGAAGAAGAGCTTGGAGCTATGAAGGAGATGATGTACAAGATCGCCGTTCTGCAGCCAGTGGACATCGACCCTACCACCATACGGAAACCCAAGCGGCAGAACGTCCGGATCAGCGACGACCCTCAGAGCGTCGCCGCTCGTCACCGCCGTGAGAGGATCAGCGAGAAATTCCGCATCCTGCAGAGACTCGTCCCCGGCGGACCCAAGCTCGACACCGCCTCCATGCTCGACGAAGCCATTCGCTACGTCAAGTTCTTGAAGAGACAAATCAGGTTGCTCCAATCTCCACCAAACTACAACAATATTATGGGTACGATCACCACCGCCGGTAATAACACCACTCTCGCCTATTGGCCTTATATACCAAACACAACACTCCCCACCGCCGCCTCCAACGGACTAGGGTTCAACGCCGGCGATAGCTCCTCAGGGTTTAACCATGAGGATTATGGTTTTGTGTGTTGTTTGAATTTTAATGATGTGGAAGAAAGCCCTAAAGGGATCAGAGATCGATCAGCTTTTACATTTAGAATTCTGGGATCTGCTTCTTGCTGGATTTCATTAAACCTAATTCCTGCAACTTTGCACTGA 798 0.4825 MNTNQNPNIHPSFTTSINNNNNNNNHPTWNMASTWPISSTSPSSSSGFLFSGMFGINLEREGEEEGEEEEEELGAMKEMMYKIAVLQPVDIDPTTIRKPKRQNVRISDDPQSVAARHRRERISEKFRILQRLVPGGPKLDTASMLDEAIRYVKFLKRQIRLLQSPPNYNNIMGTITTAGNNTTLAYWPYIPNTTLPTAASNGLGFNAGDSSSGFNHEDYGFVCCLNFNDVEESPKGIRDRSAFTFRILGSASCWISLNLIPATLH 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0508 265 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 7 194 IPR045843 GO:0003700|GO:0006355
Lele23g0508 265 Gene3D - 109 170 IPR036638 GO:0046983
Lele23g0508 265 CDD bHLH_AtIND_like 107 164 - -
Lele23g0508 265 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 112 168 IPR036638 GO:0046983
Lele23g0508 265 SMART finulus 112 161 IPR011598 GO:0046983
Lele23g0508 265 MobiDBLite consensus disorder prediction 1 27 - -
Lele23g0508 265 Pfam Helix-loop-helix DNA-binding domain 116 155 IPR011598 GO:0046983
Lele23g0508 265 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 106 155 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0508 Lele-ChrLele23 3725414 3726771 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0508 75 163 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00120 78.652 1.28e-45 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele23g0508 HLH 2.9e-07 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1492 22 20667554 20668228 Lele23g0508 23 3725414 3726771 hybridization