Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0502 ATGGCTACGACGAGATTGTTTCCTGGGTTTCGATTTCATCCGACTGATGTTGAGCTCCTTAGATACTTTCTGAGGAGGAAGGTTATGGGTAAGAAATTCCCGAATGATGTGATCGCAGAAGTAGAAATATACAAATACGCTCCATGGGATCTCCCAGATAAATCTTATCTGAGAACTGGAGATTTGGAATGGTACTTTTTTTGCCCCAGAGAAAAGAAATATGCCAGTGGGGCCAGAATGAATCGTGCTACTGAAGTTGGGTACTGGAAAACTACTGGGAGGGATAGGCCTGTGCGTTACAAGAATCAACGTGTGGGAATGATAAAAACCCTGATATTTCACACTGGTAGAGCTCCTAATGGAGATAGGACCGATTGGGTTATGCATGAATTTAGGCTCGAAGATCAGGATCTGATTGATAAAGGCATTCCTCAGGATTCCTATGTGCTTTGTAAGGTTTTCCAAAAAGATGGTCTTGGTCCTAGGAATGGTGCACAATATGGAAGACCATTCAATGATGAAGATTGGGATGATGACGATGAAATTGATGGTGTAGGATCTCTCCCATTAGTTGGTGTGCATGCACCAATTACCATTCATCCTAATACACCTGGCAGTTCTATGGCAACTTATAGTCATCCCCCTGCAAGTACATGTGTTGGATCACCACCAGGCTCATGTCTTATGCATCCTTCGGTTCCAAGTGATAAAGTTATATCCACTAATGGGTCTCAAGTTCCAGTTGTTGATGATGTTGCTGCATTGTTGGATTGTTTCATAGCGAATGACACAGTGGCTATGACTGAAAATAACATCGAGGTGCGCCATCTATTTCTTTCTCTTGTGCATTCTTTTGTAAATTCTGGTTGCAAAAAGCTGAATTTTTTAGCAAAGTATGCTTGCTTAATCCTGTTTTTCCCGAATCAATATGCTAACACGGTGTGTGTTTCTCAGAAGAATGATAATTCTGCTGTGGAGAAGGAAGCTGAAGGCGAACCTTGTTTGGATGTGAATGATATATTTAAGGACTTGGGAGACCTTGACAATACAAATACAAACCAAATGTATCAGGCTAATGATATATTTAAGGATTTGGGAGACCTTGACAACAATTCAAACCAAATCCATGCTGCAGGTAACATGCCCTTGATGTTCGATGATGATTTGGATTTCTTGGAGTTGCTTGACCTGGACACCATGGTCCCCCGCCAGCCTGAACCAAAAAGTGGGGACCATTTCATCCAGAAAAGGGAGGGTAAGGGTATGTGA 1269 0.42 MATTRLFPGFRFHPTDVELLRYFLRRKVMGKKFPNDVIAEVEIYKYAPWDLPDKSYLRTGDLEWYFFCPREKKYASGARMNRATEVGYWKTTGRDRPVRYKNQRVGMIKTLIFHTGRAPNGDRTDWVMHEFRLEDQDLIDKGIPQDSYVLCKVFQKDGLGPRNGAQYGRPFNDEDWDDDDEIDGVGSLPLVGVHAPITIHPNTPGSSMATYSHPPASTCVGSPPGSCLMHPSVPSDKVISTNGSQVPVVDDVAALLDCFIANDTVAMTENNIEVRHLFLSLVHSFVNSGCKKLNFLAKYACLILFFPNQYANTVCVSQKNDNSAVEKEAEGEPCLDVNDIFKDLGDLDNTNTNQMYQANDIFKDLGDLDNNSNQIHAAGNMPLMFDDDLDFLELLDLDTMVPRQPEPKSGDHFIQKREGKGM 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0502 422 MobiDBLite consensus disorder prediction 402 422 - -
Lele23g0502 422 FunFam Nac domain-containing protein 86 15 159 - -
Lele23g0502 422 Gene3D NAC domain 15 158 IPR036093 GO:0003677|GO:0006355
Lele23g0502 422 Pfam No apical meristem (NAM) protein 8 133 IPR003441 GO:0003677|GO:0006355
Lele23g0502 422 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Lele23g0502 422 SUPERFAMILY NAC domain 4 156 IPR036093 GO:0003677|GO:0006355
Lele23g0502 422 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0502 Lele-ChrLele23 3680733 3683337 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0502 1 276 NAC Transcription Factor Family AT5G64060 47.987 6.15e-91 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele23g0502 NAM 1.7e-34 No_clan