Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0497 ATGGGGATTTGGCATAGTATCAGAATGCTCAGTGATTTTGAGTTTTATGTGCAGATATTAGCTGGTCTCTTAAATCCTACTTCAGGAACAGTGTACGTGAAAGGGCCCAAAAGTTTTGTTTTCCAAAATCCAGATCATCAGGTAGTAATGCCTACAGTGGAAGCTGACGTTGCATTTGGTCTTGGCAAGTTCAATCTGACCCGTGATGGAGTGAGATCAAGGGTATCAAGAGCCTTGGATGCTGTGGGCATGTCTGACTACATGCAGAGATCTGTTCAAACTCTAAGTGGTGGTCAGAAGCAGAGGGTTGCCATTGCTGGTGCTTTAGCAGAAGCTTGTAAAGTTCTGTTGTTGGATGAGCTCACAACGTTCTTAGATGAAAGTGACCAGGTTGGTGTTATAAAAGCAGTTAGGAACTCTCTGGATACCTCTGCAGGGGTTACAGCATTATGGGTGACTCATCGTTTAGAAGAATTGAACTATGCTGATGGTGCCGTGTACATGGAGGAGGGGAAAGTTGTGATGGTTGGAGATGCAGAAAGAATAAAATGTTTCATTGAAGCCAGGCAATCCGACTATATCAAACAGATCAATTCTTGA 600 0.4333 MGIWHSIRMLSDFEFYVQILAGLLNPTSGTVYVKGPKSFVFQNPDHQVVMPTVEADVAFGLGKFNLTRDGVRSRVSRALDAVGMSDYMQRSVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDESDQVGVIKAVRNSLDTSAGVTALWVTHRLEELNYADGAVYMEEGKVVMVGDAERIKCFIEARQSDYIKQINS 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0497 199 CDD ABC_cobalt_CbiO_domain1 17 172 IPR015856 GO:0005524|GO:0016020|GO:0055085
Lele23g0497 199 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 18 183 - -
Lele23g0497 199 Pfam ABC transporter 18 122 IPR003439 GO:0005524
Lele23g0497 199 ProSitePatterns ABC transporters family signature. 95 109 IPR017871 GO:0005524|GO:0016887
Lele23g0497 199 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1 195 IPR003439 GO:0005524
Lele23g0497 199 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 18 183 IPR027417 -
Lele23g0497 199 Gene3D - 16 197 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0497 Lele-ChrLele23 3623192 3625046 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0497 89 198 Calmodulin-binding Proteins AT2G36910 36.937 1.83e-10 57.8