Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0485 ATGGGATCGGAAAACAAAGCGAGTAGAAGAAAAGATATTGAAGCAATGAAAAATCAAGGGTGTGAGGTTGAAGCAATAGGTATCAACTACAAGATCCGCACACAGAAAACAGAGAACCCTTTCAAAATCTTTAGCAAAGTTCCAAAACAAATCGACCAAGAGAAAGACCAAGAACCAGAAGGAGAAGGAGAAGGAGAAAAACCTGAACAAGCAGGCAGTGGTGGAGTAAGGCATGTCCTCAAGGATGTGAGCTGCCGAGCCAAGCCGCAAGAAATTCTCGCCATTGTTGGGCCAAGTGGAGCTGGAAAATCATCCCTGCTTGAGATTCTTGCTGGTGAAGTTGCCCCACAAAGTGGGTCCATCTTGGTGAACCAGAAACCTGTAGAAAATGCTCTGTTCAGGAAGACTTCAGGCTTCCTCAAGATCAACTCTGCTGCAGCCTGCAGAGTAAAGTCACTGATTCAGGAGCTAGGACTCAGCCACGTTGCCAATACACGAATTGGAGATAACAAGGCCCGTGGGATATCCGGTGGGGAAAAACGCCGAGTTTCAATTGGACTTGAAGTTATACACGACCCCAAAGTGGTGATTCTGGATGAACCAACCTCTGGGCTTGACAGCACATCCGCTCTGCAGATCATTGAAATGCTAAAGGTCATGGCTGATTCAAGGGGCCGAACTGTAATCCTAAGCATCCATCAACCTGGGTTCAGAATTGTAAAATTGCTCAATTCTATATTGTTGTTAGCCGGTGGCTGTGTTTTACACCATGGAACTGCGGATTTGTTGGGTGTCAATCTAAGATTAATGGGTTTAGAGCTTCCTCTTCATGTTAATGTAGTTGAATTTGCCATTGAGTCCATTGAATCGATTGAGAAACAGCAAAAGTGCCAGCGATTTCAAGTACAAACGCCTCCACAATTACTAGCAACAATGCAGCAAAAGAAAAACGATGTTCAAGGTGAGAGTAGAAGTGGTAAGTTCACTCTGCAGCAGCTCTTTCAACAATCAAAGGTAATTGATGAAGAAACCGTCGCCACTGGAATGGATTTCACCTGTGATTTTGCAAATTCTAGATTGAAAGAAACTATGATTCTCAGCCACAGGTTCTTCAAAAACATCTTCCGTACAAAGGAGCTCTTTGCATGTAGGACGATCCAGATGCTGATTTCAGGACTCGTTTTGGGCTCCATCTTTTGCAATCTCAAGGATGGTCTAGACGGTGCTGAAGAAAGGGTAGGTTTATTTGCCTTTATATTATCGTTCTTATTATCAAGCTCCGTAGAAGCTCTGCCAATTTTCCTGCAAGAGAGGGAGATTCTAATGAAGGAGACCTCTTGTGGAAGCTACAGAGTATCATCCTATGCTATTGCTAATGGCCTAGTTTACTCGCCATTCCTACTAATCCTAGCCATTTTATTCACAGCACCCTTATACTGGCTTGTTGGTCTTAACCGGAATTTCACAGCCTTTTTGCACTTCCTGTGGCTGATTTGGTTAGTTCTTTACACAGCAAACTCAGTTGTGGTGTGTTTCAGTGCTCTGGTGCCTAATTTTATCGTGGGGAACTCATTGATCGCTGGAGTCATCGGTTCATTCTTCTTGTTCTCGGGTTACTTCATATCAAAACAAGAAATTCCAAAATACTGGATTTTCATGCATTATATATCACTGTTTAAGTATCCCTTTGAAGGGCTTCTGATTAACGAGTTCTCCAACTCAGGTAATTGCTTAGAGTACATGTTTGGGGCGTGTGTGATGACTGAGGAAAATGTGCTTAAAGAAGAAGGGTATGGGGGCCAAAGGAGCAAATGGAAGAATGTTGGGGTCATGGTGTGCTTCATCTTGTTTTACAGGTTGGTTTCCTATATAATTCTTAGATATAGATGCTCGCAGAGAACCTCCTAA 1908 0.4313 MGSENKASRRKDIEAMKNQGCEVEAIGINYKIRTQKTENPFKIFSKVPKQIDQEKDQEPEGEGEGEKPEQAGSGGVRHVLKDVSCRAKPQEILAIVGPSGAGKSSLLEILAGEVAPQSGSILVNQKPVENALFRKTSGFLKINSAAACRVKSLIQELGLSHVANTRIGDNKARGISGGEKRRVSIGLEVIHDPKVVILDEPTSGLDSTSALQIIEMLKVMADSRGRTVILSIHQPGFRIVKLLNSILLLAGGCVLHHGTADLLGVNLRLMGLELPLHVNVVEFAIESIESIEKQQKCQRFQVQTPPQLLATMQQKKNDVQGESRSGKFTLQQLFQQSKVIDEETVATGMDFTCDFANSRLKETMILSHRFFKNIFRTKELFACRTIQMLISGLVLGSIFCNLKDGLDGAEERVGLFAFILSFLLSSSVEALPIFLQEREILMKETSCGSYRVSSYAIANGLVYSPFLLILAILFTAPLYWLVGLNRNFTAFLHFLWLIWLVLYTANSVVVCFSALVPNFIVGNSLIAGVIGSFFLFSGYFISKQEIPKYWIFMHYISLFKYPFEGLLINEFSNSGNCLEYMFGACVMTEENVLKEEGYGGQRSKWKNVGVMVCFILFYRLVSYIILRYRCSQRTS 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0485 635 Pfam ABC-2 type transporter 363 571 IPR013525 GO:0016020|GO:0140359
Lele23g0485 635 ProSitePatterns ABC transporters family signature. 175 189 IPR017871 GO:0005524|GO:0016887
Lele23g0485 635 SMART AAA_5 89 261 IPR003593 -
Lele23g0485 635 Gene3D - 138 273 IPR027417 -
Lele23g0485 635 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 17 620 - -
Lele23g0485 635 MobiDBLite consensus disorder prediction 41 75 - -
Lele23g0485 635 Gene3D - 69 137 IPR027417 -
Lele23g0485 635 Pfam ABC transporter 80 203 IPR003439 GO:0005524
Lele23g0485 635 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 77 262 IPR027417 -
Lele23g0485 635 MobiDBLite consensus disorder prediction 48 67 - -
Lele23g0485 635 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 65 276 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0485 Lele-ChrLele23 3555663 3557652 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0485 85 305 Calmodulin-binding Proteins AT2G36910 26.357 4.10e-10 61.2