Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0473 ATGCCTGCGGGTACGGGATCGCTTCTCTCTCTTGTAAATACTTTTGATTCCGTTCTCGCCGTGTACGAAGGTTTCTGCAACTTGAAGCAGGTTGATCTCAAGCTGAAAGTCTGTAGAGGTGAGTCGGCTCGGAAACTTCTTGTACGGGAGGCGAAATCGTTTGGTGCATCAACTGTAATCGTGGGGACTTCTAAAACGCATCACACAATCCGGTCTTCGGCATCCGTTGCCAAATATTGTGCGAAAAAATTGCCCAAATGTATCTCTGTCTTTGCAGTTGACAATGGCAAAATAGCGTTCCACAGAGAGGCTACAAAAATGTTTGGTGATCAAGTAAAACTAAATGAAGGCCCAGCTTTGTTAAGAAAATCCTTCACGCCCTGTACAAAGACAAATCTCAGGAACTGTGAATGTTGTGAGCGGGTGCTAGCACTTCCAGAGAGTGCTGCTATTGAAGATGTAACTGATGATCAGGAAAAGAAAGATTCACTAGCCTTAGTACCGCTCCAGAAAATTGGCAATGGTCATAGATGTGCAACTGTGGTTCAGGAATCAAACCAGTCTAAACATGGTTGGTCTGTCCTTCGCCAGGTATTTCTGCCCAAAAAGCACATGCAGAAATCGTATGTGAGCAATCCATATGTTTTTCAACGGGCAGTTAAACAGACCAGCTGGCATTCATCAGCTGTAGTCCATCCAGATCTTAAACAAATTAATATTGACAAAAATGACAGTACTACCCTTGATGGGCAGAGTGGTGCAATTGTGCCATTCAGATCTGCTGCTAACTCTGGCTTGAGTAACTTTCGTGAAGAATTGTCCAGCTTACCGGAGAAGTACTCATCTTCATGCAGAGTGTATAGTTTCCAAGAACTTGCTTCTGCAACTGCTAACTTCTCGCCTGAAAATTTGGTTGGCAAAGGTGGCAGTAGCTATGTTTATAAAGGATGTCTTCCAGATGGCAAGGAGGTAGCTGTGAAAATTTTGAAGCCATCAGAAGATGTGGTCAAAGAGTTTCTTTTGGAAATTGAGATCATCTCAACTTTGCATCATAAGAACATAATATCTTTATCTGGGTTTTCTTTTGACGACAATAATTTGCTTTTGGTTTATGATTTTCTAACAAGAGGAAGCCTAGAAGAGAACATTCATGGTGATAAGAAGGACTCTAATGAATTCAGTTGGCAAGAGAGGTATAAGGTGGCTGTGGGTGTTGCTGAGGCATTGGACTTTCTGCATAATGGCTGTATACAGGCTGTGATCCACAGGGATGTAAAATCTTCAAACATCCTTCTTTCAGATAATTTTGAGCCTCAGCTCTCCGATTTTGGACTGGCCAGTTGGGGTTCTTCTTCATCCCATGTTAATTGTAACAATGTGGCTGGAACCTTCGGATACCTGGCTCCAGAGTACTTTATGCATGGTAGGGTAACTGACAGAATTGATGTATACGCTTTTGGTGTTGTGCTTCTTGAGCTTCTTTCTGGCAGGAAGCCCATCAATAACGAATCCCCCAAGGGCCAGGAGAGCCTTGTGATGTGGGCAAGGCCAATTCTAAAGGATGGAAAGCTCTCCCAGTTGCTTGATTCAAGCATTAGCGATCTTGAAAATTGGTTGATTGACAGAATGGTTTTGGCTGCTACCCTTTGCCTCAGACGATCACCTAAATGTCGACCTGAAATCAGCATCATATTGAAACTTCTGCATGGTGATGGGGAAGTCACAAGTTGGGCAAAACAAGAAGTTGGCGAACCAGAAGAACTTGACGCATTTGATGGTGGACTGAACAATATTCAGTCGCATCTGAACCTTGCTTTGCTGGACCTGGACGATGATACAGTTTCTGTAAGTAGCTCTGAGCAGAGTGTCTCATTGGAGGACTATTTACAAGGAAGATGGAGTCGCTCATCAAGTTTTGATTAA 1923 0.4321 MPAGTGSLLSLVNTFDSVLAVYEGFCNLKQVDLKLKVCRGESARKLLVREAKSFGASTVIVGTSKTHHTIRSSASVAKYCAKKLPKCISVFAVDNGKIAFHREATKMFGDQVKLNEGPALLRKSFTPCTKTNLRNCECCERVLALPESAAIEDVTDDQEKKDSLALVPLQKIGNGHRCATVVQESNQSKHGWSVLRQVFLPKKHMQKSYVSNPYVFQRAVKQTSWHSSAVVHPDLKQINIDKNDSTTLDGQSGAIVPFRSAANSGLSNFREELSSLPEKYSSSCRVYSFQELASATANFSPENLVGKGGSSYVYKGCLPDGKEVAVKILKPSEDVVKEFLLEIEIISTLHHKNIISLSGFSFDDNNLLLVYDFLTRGSLEENIHGDKKDSNEFSWQERYKVAVGVAEALDFLHNGCIQAVIHRDVKSSNILLSDNFEPQLSDFGLASWGSSSSHVNCNNVAGTFGYLAPEYFMHGRVTDRIDVYAFGVVLLELLSGRKPINNESPKGQESLVMWARPILKDGKLSQLLDSSISDLENWLIDRMVLAATLCLRRSPKCRPEISIILKLLHGDGEVTSWAKQEVGEPEELDAFDGGLNNIQSHLNLALLDLDDDTVSVSSSEQSVSLEDYLQGRWSRSSSFD 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0473 640 ProSitePatterns Protein kinases ATP-binding region signature. 305 327 IPR017441 GO:0005524
Lele23g0473 640 ProSiteProfiles Protein kinase domain profile. 299 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g0473 640 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 268 373 - -
Lele23g0473 640 SMART serkin_6 299 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g0473 640 Gene3D Phosphorylase Kinase; domain 1 269 373 - -
Lele23g0473 640 Pfam Protein kinase domain 302 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g0473 640 PANTHER OS08G0249100 PROTEIN 14 581 - -
Lele23g0473 640 SUPERFAMILY Protein kinase-like (PK-like) 279 568 IPR011009 -
Lele23g0473 640 Gene3D Transferase(Phosphotransferase) domain 1 374 584 - -
Lele23g0473 640 ProSitePatterns Serine/Threonine protein kinases active-site signature. 420 432 IPR008271 GO:0004672|GO:0006468
Lele23g0473 640 FunFam Putative receptor-like serine/threonine-protein kinase 374 584 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0473 Lele-ChrLele23 3458713 3461763 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0473 287 639 Trihelix Transcription Factor Family AT1G70460 40.443 5.49e-76 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lele23g0473 Pkinase 8e-43 CL0016