Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0455 ATGGCACACATTGCTTCAACTGCTTCAGCCACATTTTTGGCTCTTCAGCGCGGGACAAGGCAACAGAGTAAAATTTTTCCGGGCTTTTCGAGCAGTAGGGGAATTCGTTCTTTCTTATTTACAAATTCTCCGAGGAAACGGTTGCAAGAACGATTGTTTTCTTCTGGGACAAATAGCAGCAATGTAGATATTGTGGAGATATCTGAGAGTGAAAAGAAACTAAGGAACTTCGCTTGGCCTGATACGAGGAAGCCTAGGGTGTGCATATTGGGTGGTGGATTCGGCGGTTTATATACTGCATTAAGGTTGGAATCACTTGTGTGGTCTGACGACAAAAAGCCACAGGTTCTTCTTGTTGACCAGTGTGAACGTTTTGTTTTCAAGCCCATGTTGTACGAGCTTCTATCTGGAGAAGTGGACGAATGGGAAATAGCTCCCCGATTCTTAGATTTGCTGGCAAACACTAGCGTCCAGTTTTTGCAAGATAGAGTTAAACTTCTGCATCCCTCTGATAATTGGGGAATGGATGGACCGCCAACATCTAGTTGTGGAGGAACAGTGCTTCTTGAAAGTGGCCTTTCTATAGAATATGACTGGCTGGTTCTTGCTTTGGGAGCTGAAAGTAAACTTGATTTCGTACCAGGAGCAACTGAGTTTGCACTGCCATTCTCCACACTAGAGGATGCAATTAAAGTTAATACTAATTTAAAAACATTGGAGAGAAAATACTTCGGTAAGGATTCCCAAATCAGCGTCGCAGTTGTTGGCTGTGGTTACTCTGGAGTTGAGTTAGCTGCTACAGTGGCAGAGAGATTAAAGGACAAAGGGGTTGTTAGAGCAATTGATGCTGAAAACATGATCTGCCCAACTGCCCCGCCTGGCAATAGAGAAGCTGCACTGAAAGTTCTTTCATCCAGAAAGGTTGAACTTCTATTGGGCTTTCTAGTCCGGTGCATTCAGGGGGTGAGCTACTTGGAGTCTTCAGATACCCTGACAGGGGAAGGTGAAAACGAGGGAAATCAAGCTCTTGTTGATGATTCTGATAAATATGTTTTGGAGCTGCAACCTAGAGAAAGGGGATTACAAAGGAGAATTCTAGAAGCAGATCTGGTATTGTGGACTGTTGGTTCTAAATCTTCCCTTACTCAGATAGAACCCTCAGATTTATCATATCCACTTCCTCTTAATGGCCGGGGGCAAGCAGAAACAGATGAAACTCTTCGTGTTAAGGGCCACCCACGGATATTTGCTCTTGGCGACTCCTCTGCAATAAGAGATTCACATGGAAGGATCCTTCCAGCCACTGCTCAGGTTGCTTTTCAGCAAGCTGACTTCGCTGGTTGGAATCTGTGGGCCGCGATCAATGGCCGTCCACTTTTGCCATTTAGGTTTCAGAATCTGGGCGAGATGATGACACTGGGAAGAAATGACGCTGCCATTTCTCCCAGTTTTGTTGAGGGGCTGACCTTCGAAGGTCCCATTGGTCATACAGCAAGGAAACTAGCATATTTGTTGAGGTTACCAACAGATGAACATAGGCTTAAAGTGGGGATAAGCTGGTTCACAAAATCTGCCATTGATTCAGTGGCTTCACTACAGAGCTCCTTAACCAAGGTTCTTTCCGGTTCTTAA 1632 0.4491 MAHIASTASATFLALQRGTRQQSKIFPGFSSSRGIRSFLFTNSPRKRLQERLFSSGTNSSNVDIVEISESEKKLRNFAWPDTRKPRVCILGGGFGGLYTALRLESLVWSDDKKPQVLLVDQCERFVFKPMLYELLSGEVDEWEIAPRFLDLLANTSVQFLQDRVKLLHPSDNWGMDGPPTSSCGGTVLLESGLSIEYDWLVLALGAESKLDFVPGATEFALPFSTLEDAIKVNTNLKTLERKYFGKDSQISVAVVGCGYSGVELAATVAERLKDKGVVRAIDAENMICPTAPPGNREAALKVLSSRKVELLLGFLVRCIQGVSYLESSDTLTGEGENEGNQALVDDSDKYVLELQPRERGLQRRILEADLVLWTVGSKSSLTQIEPSDLSYPLPLNGRGQAETDETLRVKGHPRIFALGDSSAIRDSHGRILPATAQVAFQQADFAGWNLWAAINGRPLLPFRFQNLGEMMTLGRNDAAISPSFVEGLTFEGPIGHTARKLAYLLRLPTDEHRLKVGISWFTKSAIDSVASLQSSLTKVLSGS 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0455 543 FunFam Alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial 82 516 - -
Lele23g0455 543 PANTHER APOPTOSIS-INDUCING FACTOR 1 21 539 - -
Lele23g0455 543 SUPERFAMILY FAD/NAD(P)-binding domain 83 455 IPR036188 -
Lele23g0455 543 Pfam Pyridine nucleotide-disulphide oxidoreductase 86 443 IPR023753 GO:0016491
Lele23g0455 543 Gene3D - 82 516 - -
Lele23g0455 543 SUPERFAMILY FAD/NAD(P)-binding domain 244 381 IPR036188 -
Lele23g0455 543 PRINTS FAD-dependent pyridine nucleotide reductase signature 368 384 - -
Lele23g0455 543 PRINTS FAD-dependent pyridine nucleotide reductase signature 87 106 - -
Lele23g0455 543 PRINTS FAD-dependent pyridine nucleotide reductase signature 251 269 - -
Lele23g0455 543 PRINTS FAD-dependent pyridine nucleotide reductase signature 197 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0455 Lele-ChrLele23 3301061 3305502 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0455 82 444 Chloroplast and Mitochondria Gene Families AT4G21490 24.267 2.61e-06 48.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0455 23 3301061 3305502 Lele23g0455 23 3301061 3305502 ECH
Lele21g1561 21 23758949 23763424 Lele23g0455 23 3301061 3305502 hybridization
Lele22g1543 22 21091365 21096461 Lele23g0455 23 3301061 3305502 hybridization