Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele23g0448 | ATGTTTTTCGTTTGCCATTGGTTATTATCAGTTGTTGCCACCTCCCATCCCCAAACCGTCGTTACCGAAATTCAATCGAGCATTCATGGTCCCACTCAAGTTCATGCTCGCCGGAAGGGCACCGGAGTGAAGGTGTGGCTCGTCGTATCGGAGACTGGGCAGTCGCACCTCGAGGAGGTTGAAAAGCACTCCATCATGAGGCGTACCGGCTTACCGGCTCGTGATCTTCGTGCTCTCGATCCAATGTTGTCGTATCCATCCTCCATTCTTGGACGCGAGAGAGCCATCGTCGTCAATTTGGAGCACATTAAAGCTGTAATTACAGCCAAGGAGGTCTTCTTGATCGATTCCTATAATACATTGTTCGTTCAATTTGTTCAAGATCTTCAGACTCGCGTTTCTACTAATAATGGAGCGCCTCTTCAAATGAGTAAAGAAAATGATAATGAGTTCGCAGCCAATCAACTGCCTCCTTCCCTGCGCAATCGTCATCATTCCCTAAAGAATTTAATCAAAGGAACGTCTGAGAGTATTAAGAGTTCAGATACGTCAAACATTGATGTTAAAGAGGATAGTCATAAGAGTTCAGATGTTGAGCCGGTGGCTGCAGCTCCTAAGCAGTTGCCTTTCGAATTTAGAGCACTTGAAGCTTGTCTTGAATCTGCATGCAGGTGCCTTGAATCTGAGACTCAAACACTGGAAGAAGAGGCTTACCCAGCTCTAGATGAATTGACTTCTCAAATTAGCACACTCAATCTTGAACGCGTGAGACAGATCAAGAGTTGTCTAGTTATTCTTTCTGGTCGTGTGCAAAAGGTACGAGACGAACTCGAGAATTTGTTAGACGATGACAATGACATGGCTGAAATGTACTTGACGCGAAAGCTTGCTTCTCGCTCCCTAGATCAATCATCGCCAAGAGAAGTCTCTTCAGTGGAAGAAGATGACCATAGAGCTGAAGATTCCAATTCAGAAGACACTGACATTTCTACTACTGTTAAGCCCGACGTTGAGGAATTGGAGATGCTCATAGAAGCATATTTTGCAGAGTTAGATGGCATATTGCAAAAACTGTCCGATATGAGTGAGTACGTGGACGACACAGAGGACTGCATCAACATAATGTTGGATGATAAGCAGAATCAGCTGTTGCAGGTATCAGTAAAACTCAATACAGCAAACTTGATACTAGGTGCCGGCATCGCTGTGGTGGGTTTGTTTGGGATGAATATTCATATCAGTTTGTATGATGGAACGAATAGACAATTCTTGGGAATAGCCTGGGGAATAATAGGAAGCTGTCTGGGATTATATGCTATTGCTGTTGGATGGGGTAAGAAAAGATATTTGTTACCGTCTTAG | 1362 | 0.4413 | MFFVCHWLLSVVATSHPQTVVTEIQSSIHGPTQVHARRKGTGVKVWLVVSETGQSHLEEVEKHSIMRRTGLPARDLRALDPMLSYPSSILGRERAIVVNLEHIKAVITAKEVFLIDSYNTLFVQFVQDLQTRVSTNNGAPLQMSKENDNEFAANQLPPSLRNRHHSLKNLIKGTSESIKSSDTSNIDVKEDSHKSSDVEPVAAAPKQLPFEFRALEACLESACRCLESETQTLEEEAYPALDELTSQISTLNLERVRQIKSCLVILSGRVQKVRDELENLLDDDNDMAEMYLTRKLASRSLDQSSPREVSSVEEDDHRAEDSNSEDTDISTTVKPDVEELEMLIEAYFAELDGILQKLSDMSEYVDDTEDCINIMLDDKQNQLLQVSVKLNTANLILGAGIAVVGLFGMNIHISLYDGTNRQFLGIAWGIIGSCLGLYAIAVGWGKKRYLLPS | 453 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele23g0448 | 453 | PANTHER | RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL | 34 | 448 | IPR039204 | - | |
| Lele23g0448 | 453 | Gene3D | Magnesium transport protein CorA, transmembrane region | 120 | 383 | - | - | |
| Lele23g0448 | 453 | Coils | Coil | 263 | 283 | - | - | |
| Lele23g0448 | 453 | FunFam | Magnesium transporter MRS2-E | 160 | 383 | - | - | |
| Lele23g0448 | 453 | Coils | Coil | 337 | 357 | - | - | |
| Lele23g0448 | 453 | CDD | Mrs2_Mfm1p-like | 46 | 448 | IPR039204 | - | |
| Lele23g0448 | 453 | Gene3D | - | 33 | 117 | - | - | |
| Lele23g0448 | 453 | MobiDBLite | consensus disorder prediction | 308 | 332 | - | - | |
| Lele23g0448 | 453 | MobiDBLite | consensus disorder prediction | 299 | 332 | - | - | |
| Lele23g0448 | 453 | MobiDBLite | consensus disorder prediction | 183 | 197 | - | - | |
| Lele23g0448 | 453 | FunFam | Magnesium transporter MRS2-1 | 34 | 117 | - | - | |
| Lele23g0448 | 453 | MobiDBLite | consensus disorder prediction | 174 | 200 | - | - | |
| Lele23g0448 | 453 | Coils | Coil | 216 | 236 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele23g0448 | Lele-ChrLele23 | 3228066 | 3232432 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele23g0448 | 45 | 451 | MRS2 Gene Family | AT3G19640 | 48.786 | 1.19e-125 | 372 |