Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0429 ATGGTGTCAGAAAAGCGTGCCACTGAAAAAGTCCAACAAATTCCCAAAGAATTAATGGCTCCTGCACTAAGGATTATTCAATTCAACATGCTTCCTTTGAGGGACCTCGCCGACGCAATAGCTGAAAAATTGCAGGAACAGCTGTATGTGGGTGCTGAGCTGCATGGAAAAAAGGATGATGGGGAGCATCCCTGCAAAATATTGAAAGTCATGCAGGAAGGTGTTGATGAATCCCGTTATGAGGTAGCTTGGCTTGACAAGAATAAGAGAACAATCGAAAAGGCAGAAGTCAGTGCCAAGGATTTGGTGCAGAAGAAGTTTCCTTTTAGCAGGAACATCTTGAAATCTTTTATCCGGGAATCTACATATCGTAATGCTCCATGGGTGATACATGATGAATTGGCACAAAATTATGGAATCTCAACTGATATCCCAGAGGAATTAAAAGGAAGAGCTTTCTTCAACAATGGACTTTTAATTTACAACAAGAAAAGGAAAATTGAGGATATAAATGGAGAAGCTGAAAATTGCAAAAGGAGTAAGTCGGATCACTCGGTGAAAGAAAATGGCCAACGTAAGGAAGCTCCTATCAAATATCCGATTGATGATTTATTGGTGAAGCCTAGGCCAAATGATCCTGATCGTCCTTCTCCATCAAGAGACTTCATTGTTCCGACCCATTGTGTAGGGGATCTCTTAATGGTTTGGGATTTTTGTACTTCTTTTGGTAGGCTGTTGCACTTGTCACCCTACTCTCTGGAAGATTTTGAAAACTCAATCTGCCACAAGGAAAGCAACGTGGTTCTCCTTGTGGAATCTCATGCAGCACTCTTGCGGGTGCTCATGAAAGACGATGGTGAGTATGCTTCAGCTGTACAGAAAAGAAAACGGAAGTTTAAGATTACAATGACTAATTGGCAAGAATATTTATGCGATTTTCTAGAAATGATCAATGTTCCTGGATTACAGCAGTTTGAAGCTACCATAAAAAGGGGACATTATGGCCTCGTTCATATCAATGCTAAGCTAGAAATCGTGTGTGAATTGGTCAATCGAGTTCTTGAAACCTCCATTTTTAGGGAAAAGTTGGACGAAGTTATTGAACAGCGGCAGGCACTTGGTGCTACTAAGAGAGGAGAAGCGCTAGAAGATGGTAGAAAAAGAAGAGAAGAGAAGGAACGGTTGAAAGGTGAGTTTGATAGCAATGGAAGTATGGATGTGCACTGTCAAATAAATGTAGCAACTGTCTCAGCAAAAAATAGTCACAGCAAACAGAACGGAGACATAGGAAAGAAAAGAAATGGAGAGAAGGAATCATCTTGGAACGGGGATGCTGCGGGTGGAAGTATGGATAAGCATTCAAATGGTGCATCCAAAAAGTCATCTAAGAAGCTGAGTTTAGAACTGAAAGAACCAGCAGAAAATGGAAATGACTCATCCAGAAAGGAATCACAGAAGCAATTAAACGGGGAGAAGAATCCATCAGAGAAGAATAGTTTTGAACAGAGGAGAGAATATTTTGAACGAGAGATGGAAAAACGATTTGTTCGTACAAGTCCCCTAGGTAAAGACAGGCATTACAACAGGTATTGGTGGTTTCGCCGTGATGGGAGGATATTTGTAGAAAGTTCTGATTCCAAGGAGTGGGGCTACTACAGCAGCAAGGAAGAGCTTGAGGCATTGATGAGGTCACTGAATCGCAAGGGTGTGCGGGAAAGATCATTGCAAAAGCAACTGGAAAAATATTATAGTAGAATATGTACGGAACTTCAGAAGAGATCAAAGGATCAGATACAGAAGATTGCACTAGATGAGTCTGTGCTCCGAAGGTCAACTCGTGTTCGAGCGCCACCTAGAGAAAATCCCGCCAATGCTTTCCTCAGATATGTTAACAAGTGGAAGGAAGAGTAG 1911 0.4155 MVSEKRATEKVQQIPKELMAPALRIIQFNMLPLRDLADAIAEKLQEQLYVGAELHGKKDDGEHPCKILKVMQEGVDESRYEVAWLDKNKRTIEKAEVSAKDLVQKKFPFSRNILKSFIRESTYRNAPWVIHDELAQNYGISTDIPEELKGRAFFNNGLLIYNKKRKIEDINGEAENCKRSKSDHSVKENGQRKEAPIKYPIDDLLVKPRPNDPDRPSPSRDFIVPTHCVGDLLMVWDFCTSFGRLLHLSPYSLEDFENSICHKESNVVLLVESHAALLRVLMKDDGEYASAVQKRKRKFKITMTNWQEYLCDFLEMINVPGLQQFEATIKRGHYGLVHINAKLEIVCELVNRVLETSIFREKLDEVIEQRQALGATKRGEALEDGRKRREEKERLKGEFDSNGSMDVHCQINVATVSAKNSHSKQNGDIGKKRNGEKESSWNGDAAGGSMDKHSNGASKKSSKKLSLELKEPAENGNDSSRKESQKQLNGEKNPSEKNSFEQRREYFEREMEKRFVRTSPLGKDRHYNRYWWFRRDGRIFVESSDSKEWGYYSSKEELEALMRSLNRKGVRERSLQKQLEKYYSRICTELQKRSKDQIQKIALDESVLRRSTRVRAPPRENPANAFLRYVNKWKEE 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0429 636 ProSiteProfiles WAC domain profile. 1 62 IPR013136 -
Lele23g0429 636 MobiDBLite consensus disorder prediction 415 501 - -
Lele23g0429 636 SMART testlast3 226 287 IPR018501 -
Lele23g0429 636 MobiDBLite consensus disorder prediction 463 501 - -
Lele23g0429 636 MobiDBLite consensus disorder prediction 377 401 - -
Lele23g0429 636 MobiDBLite consensus disorder prediction 425 439 - -
Lele23g0429 636 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 516 582 IPR028941 -
Lele23g0429 636 PANTHER BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN, 2A 2 634 - -
Lele23g0429 636 Coils Coil 85 105 - -
Lele23g0429 636 MobiDBLite consensus disorder prediction 376 403 - -
Lele23g0429 636 ProSiteProfiles DDT domain profile. 226 287 IPR018501 -
Lele23g0429 636 Pfam DDT domain 227 284 IPR018501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0429 Lele-ChrLele23 3103040 3107477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0429 323 581 Homeobox Transcription Factor Family AT5G44180 26.471 9.84e-09 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Lele23g0429 WSD 1.9e-22 No_clan