Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0419 ATGGCTTCCCCTCCGGTGAATTCTTTACCCATAGCGTATCAGGCATGGACGAGCGTCGCCGTACCCGACTGGTTGAACAAAGGGGACAACGCGTGGCAGATGATATCGGCGACTCTGGTAGGGATACAGAGTATGCCGGGGCTTGTGATTCTGTACGGAAGCATTGTGAAGAAGAAATGGGCCGTCAACTCTGCTTTCATGGCTCTCTATGCCTTCGCCGCCGTTTGCATCTGCTGGGTCACCTGGGCCTACAACATGTCCTTCGGTGACAAGCTTCTGCCCTTCTGGGGGAAGGCTGGGCCGGCGTTGGGGCAGAAGTTTCTGGTCCGTCAGGCGGCGCTGCCGGCAACCCCGCATTATCATAAGAACGGGGAGCCAGAGACGCCGGAGACAGAGCCGTTCTACCCGATGGCGACGATGGTGTGGTTTCAGTGCGTGTTCGCGGCTATCGCGGTGGTTATACTGGCCGGATCGGTTCTGGCGAGGATGAATTTCAAAGCGTGGATGATGTTTGTGCCGTTGTGGCTGACGTTTTCATACACCGTCGGAGCATTCACCTTGTGGGGCGGTGGGTTCTTGTTTCACTGGGGTGTCATGGACTACTCCGGCGGCTACGTCATCCACCTTTCTTCTGGGATTGCTGGTTTCACCGCCGCTTACTGGGTGGGCCCAAGGTTGAAGAAAGATAGAGAGCGGTTTCCGCCGAACAATGTGTTGCTGACGCTGGCGGGGGCGGGGCTGCTGTGGCTGGGATGGGCGGGCTTCAACGGCGGCGATCCCTACTCGGCCAACACCGACTCGTCCATGGCGGTTCTCAACACCAACATATGCGCCGCCACCAGTGTGCTGGTGTGGACGTGGCTTGACGTCATCTTCTTCAAGAAACCATCTGTCATCGGAGCCGTTCAGGGCATGATCACCGGTCTCGTCTGCATCACTCCCGGCGCCGGTATGTTCCCTATTTTGGCGGCCTACTACGTCGTTGTTTTGTTTTCTTGTCTGGTTCAAGGATGGGCAGCCATAGCGATGGGGTTACTATCAGGTAGTGTGCCATGGTGGAGCATGATGATATTAGGCAAGAAACTCAAGATATTCCAAATGGTGGATGACACTCTCGCCGTCTTCCACACTCACGCCGTCGCAGGACTTCTCGGCGGCATCCTCACCGGCCTCTTTGCAGAGCCTCGCCTCAGTGCTCTCTTTCTCCCCGTCACCAACTCCAGAGGAGGAGTGTACGGCGGCTCCGGCGGTGTCCAGATCGGCAAACAAATCGTGGGAGGGCTGTTCATCATAGGATGGAACCTAGTGGTGACATCCATCATATGTGTGGTCATAAGTTTTATAATTCCTCTGAGGATGTCGGAGGAGGAATTGGAGATCGGAGACGACGCCGTTCACGGAGAAGAAGCTTATGCGTTGTGGGGTGACGGAGAGAAGTTGAGTATATATTCTGACGATACTACTCATCACCACCATGGAGTTTTAGCATCAAGTGGTGCCACTCAAGTCCTCTAA 1515 0.5551 MASPPVNSLPIAYQAWTSVAVPDWLNKGDNAWQMISATLVGIQSMPGLVILYGSIVKKKWAVNSAFMALYAFAAVCICWVTWAYNMSFGDKLLPFWGKAGPALGQKFLVRQAALPATPHYHKNGEPETPETEPFYPMATMVWFQCVFAAIAVVILAGSVLARMNFKAWMMFVPLWLTFSYTVGAFTLWGGGFLFHWGVMDYSGGYVIHLSSGIAGFTAAYWVGPRLKKDRERFPPNNVLLTLAGAGLLWLGWAGFNGGDPYSANTDSSMAVLNTNICAATSVLVWTWLDVIFFKKPSVIGAVQGMITGLVCITPGAGMFPILAAYYVVVLFSCLVQGWAAIAMGLLSGSVPWWSMMILGKKLKIFQMVDDTLAVFHTHAVAGLLGGILTGLFAEPRLSALFLPVTNSRGGVYGGSGGVQIGKQIVGGLFIIGWNLVVTSIICVVISFIIPLRMSEEELEIGDDAVHGEEAYALWGDGEKLSIYSDDTTHHHHGVLASSGATQVL 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0419 504 Pfam Ammonium Transporter Family 31 471 IPR024041 GO:0008519|GO:0016020|GO:0072488
Lele23g0419 504 PANTHER AMMONIUM TRANSPORTER MEP2 17 480 IPR001905 GO:0008519|GO:0016020|GO:0072488
Lele23g0419 504 ProSitePatterns Ammonium transporters signature. 200 225 IPR018047 GO:0008519|GO:0016020|GO:0072488
Lele23g0419 504 Gene3D Ammonium transporter AmtB like domains 11 474 IPR029020 -
Lele23g0419 504 SUPERFAMILY Ammonium transporter 24 453 - -
Lele23g0419 504 FunFam Ammonium transporter 12 474 - -
Lele23g0419 504 TIGRFAM amt: ammonium transporter 29 471 IPR001905 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0419 Lele-ChrLele23 3030711 3033874 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0419 137 490 Inorganic Solute Cotransporters AT2G38290 67.232 1.06e-159 456