Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0418 ATGCTTCGCCCAGAATTTATTGGGGATACTCTAAAATTAATCACAAGGTTACTGATATTCCTCGGTGTCTTGAGACTCAGTTCTGCAATCACAAATCCTGATGTGGAAGGTGAAGCTTTGGCTGAAGTTAGGAACGCTCTCCATGATCCCAACCATCAAATGGCGGATTGGAACTATTTTTTTGTGTCTGCATGCGTTAGTTGGTCCCATGTCACTTGTAGAAATGGACACGTTATAGCTCTGAGCCTGGGTTCATATGGACTTTCTGGAACAATATCTCCTTCAATAACCAGATTGAAGTATTTGTCTAGCTTAGACTTGCAGAACAACAAATTCACAGGCCCGTTGCCTGATTATATTGCCAATCTGTCACAACTTCAATATCTCAATCTTGGAGACAATGATTTTAGTGGTTCTATTCCAGCTAGCTGGGGCAAACTTCAAAGTCTAAAGAATCTGATCTTGAGAGGGAATGATTTATCCGGACCCGTACCAGATACTCTTGCTAATATTAGTGGATTAGCAGAATTAGATCTTTCATCTAATGGTCTAACTGGAGACATCCCAATGCAACTCTTTTCAGTTCCAAGCTTCAACTTTTCAAATACACAACTTCATTGTGGATTTCACTTGGAGCGGCATTGTGTTTCTAATTCTGCTACTCCAGCTTCTACCAACAGATCAAAAGTTGCAGTGGTTGTAAGTTTTGCTAGTTGTGGTGCATTAGCACTTCTTTGTCTTGGGGCTATCTTTGCATATAGATACTGTTACATACACAGACACAAAAATGAAGTTTTCTTTGATGTTTCAGGTGAAGATGAGAGCAAAATTTCCTTGGGACAACTGAGAAGATTTTCCTTGAGAGAGCTACAACTTGCCACTAAAAATTTCAGTGAAAGCAATGTGATAGGCCAAGGAGGCTTTGGAAAAGTTTACAAAGGGGTACTTTCAGATGACACCAAAGTTGCAATCAAACGTCTAGTTGATTATAATAATCCTGGTGGAGAGGCTGCGTTCCAAAGAGAAGTTCAACTAATAAGTGTTGCAGTTCACAGGAATCTCCTTCGCTTAATTGGATTCTGCACAACCTCTACTGAGAGAATCCTTGTTTACCCTTTCATGGAAAATCTAAGCGTCGCATATCGCTTGAGAGATTTAAAACCTGGTGAGAAAGGCTTGGACTGGCCAGCAAGGAAGCGTGTGGCTTTTGGTACAGCACATGGCTTGGAGTATCTCCATGAGCAATGTATTCCCAAGATTATACACAGGGATTTGAAGGCTGCAAACATCTTATTAGACAATGACTTTGAAGCTGTACTTGGAGATTTTGGATTGGCTAAGCTTGTTGATACAAGATTGACCCATGTTACCACTCAAGTGAGAGGCACAATGGGTCATATTGCCCCAGAATATCTGTCCACAGGAAAATCATCTGAGAAAACCGATGTCTTTGGATACGGCATAACTCTTCTTGAACTCGTCACCGGTCAGCGCGCCATAGACTTGTCCCGGCTCGAAGAGGAGGAGGATGTTCTTCTTCTTGATCATATAAAGAAGCTGCTGAGAGAGAACAGGCTAGAGGACATAGTGGATAGGAATCTGGAGAGTTATGATCCAAAAGAAGTGGAAACAATAGTGCAAGTCGCATTGCTTTGCACACAAGGGATGCCAGAGGACAGGCCAAGCATGTCAGAGGTAGTGAACATGCTGCAGGGAGTGGGTTTAGCAGAGAGATGGGCAGAGTGGGCGCAATTGGAAGAGATCAGTCATCAGGAATTCTCATCGCTTTCTCATCACTTTGCTTGGGCTGAGGAATCCACTCTTCAAGAGGCCATACAGCTTTCCACTGCAAGATGA 1857 0.4254 MLRPEFIGDTLKLITRLLIFLGVLRLSSAITNPDVEGEALAEVRNALHDPNHQMADWNYFFVSACVSWSHVTCRNGHVIALSLGSYGLSGTISPSITRLKYLSSLDLQNNKFTGPLPDYIANLSQLQYLNLGDNDFSGSIPASWGKLQSLKNLILRGNDLSGPVPDTLANISGLAELDLSSNGLTGDIPMQLFSVPSFNFSNTQLHCGFHLERHCVSNSATPASTNRSKVAVVVSFASCGALALLCLGAIFAYRYCYIHRHKNEVFFDVSGEDESKISLGQLRRFSLRELQLATKNFSESNVIGQGGFGKVYKGVLSDDTKVAIKRLVDYNNPGGEAAFQREVQLISVAVHRNLLRLIGFCTTSTERILVYPFMENLSVAYRLRDLKPGEKGLDWPARKRVAFGTAHGLEYLHEQCIPKIIHRDLKAANILLDNDFEAVLGDFGLAKLVDTRLTHVTTQVRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDLSRLEEEEDVLLLDHIKKLLRENRLEDIVDRNLESYDPKEVETIVQVALLCTQGMPEDRPSMSEVVNMLQGVGLAERWAEWAQLEEISHQEFSSLSHHFAWAEESTLQEAIQLSTAR 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0418 618 Pfam Leucine rich repeat N-terminal domain 35 73 IPR013210 -
Lele23g0418 618 ProSitePatterns Protein kinases ATP-binding region signature. 303 325 IPR017441 GO:0005524
Lele23g0418 618 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 18 581 - -
Lele23g0418 618 SUPERFAMILY L domain-like 37 208 - -
Lele23g0418 618 ProSiteProfiles Protein kinase domain profile. 297 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g0418 618 FunFam Somatic embryogenesis receptor kinase 1 266 373 - -
Lele23g0418 618 Gene3D Ribonuclease Inhibitor 33 217 IPR032675 -
Lele23g0418 618 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 34 192 - -
Lele23g0418 618 FunFam Somatic embryogenesis receptor-like kinase 1 374 590 - -
Lele23g0418 618 Gene3D Phosphorylase Kinase; domain 1 266 373 - -
Lele23g0418 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 420 432 IPR008271 GO:0004672|GO:0006468
Lele23g0418 618 Pfam Leucine rich repeat 102 160 IPR001611 GO:0005515
Lele23g0418 618 Gene3D Transferase(Phosphotransferase) domain 1 374 590 - -
Lele23g0418 618 SMART serkin_6 297 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g0418 618 Pfam Protein kinase domain 298 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g0418 618 SUPERFAMILY Protein kinase-like (PK-like) 275 570 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0418 Lele-ChrLele23 3022180 3025770 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0418 18 618 Receptor kinase-like Gene Family AT5G10290 56.013 0.0 652
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lele23g0418 Pkinase 7.6e-44 CL0016