Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0410 ATGGGCCGATCTCCTTGCTGCGAGAAACAACACACCAACAAAGGCGCTTGGACCAAAGAAGAAGACCAACGCCTCATCAACTACATCTCCCTCCACGGCCAAGGCTCCTGGCGTTCCCTCCCCAAAGCCGCTGGTTTGCTAAGATGTGGGAAAAGTTGCAGGCTCAGATGGATTAACTATCTAAGACCTGATCTTAAGAGAGGCAATTTTACTCAGGAAGAAGACGACCTTATCATTAATCTTCACAGCTTACTCGGAAACAAGTGGTCTCTGATAGCAGCTAGGTTACCGGGTCGAACCGATAATGAGATCAAGAACTACTGGAACACACACATCAAGCGTAAACTCTACAGCCTTGGAATCGACCCTCAAACGCACCGTCCACTTACCTCAGCTGCCGCAGCAACCACTACCACCACCACCACTCCGGCGATCGGCGGTAACAAGAGAAGTACCAGTAACGACAAGAATAACCCTAAACTGAAGCTAGTCTCATCATCAGGGGAAGATTCAAACAGTAATAGCAGCAGTGGGATTACCACAGACGAATCAGCCAATTCTGATAATCATCATCATCATCAACAACAACTCAACTTGGAGCTCTCCATAGGTCTTCCTTCTTCCTCTAACGACGATAAAACCCTCGTCGTTCACCCCTCAGACAATTTAAAAGGGCAACGTGAGGAAGAAGAAGAAGTGTGTTTGTGTTGCAGTTTAGAGTTTCAGAGCGTCGTTGGTGGGGGTAATAATCAAGCATGTAGGTGCAAAGCCATGAGGAATAGTATTTGTTCAGTAATTACTACTGCACCTACTTCTTCTACTGCAGCATCAGACAACAACGTTTCCAGATTTTCCATCACCTCCTTCAATTCTTAG 876 0.4646 MGRSPCCEKQHTNKGAWTKEEDQRLINYISLHGQGSWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTQEEDDLIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYSLGIDPQTHRPLTSAAAATTTTTTTPAIGGNKRSTSNDKNNPKLKLVSSSGEDSNSNSSSGITTDESANSDNHHHHQQQLNLELSIGLPSSSNDDKTLVVHPSDNLKGQREEEEEVCLCCSLEFQSVVGGGNNQACRCKAMRNSICSVITTAPTSSTAASDNNVSRFSITSFNS 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0410 291 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 201 - -
Lele23g0410 291 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele23g0410 291 FunFam MYB-related transcription factor 13 66 - -
Lele23g0410 291 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lele23g0410 291 Gene3D - 14 66 - -
Lele23g0410 291 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele23g0410 291 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Lele23g0410 291 FunFam Myb transcription factor 68 137 - -
Lele23g0410 291 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Lele23g0410 291 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele23g0410 291 Gene3D - 69 116 - -
Lele23g0410 291 CDD SANT 16 61 IPR001005 -
Lele23g0410 291 SMART sant 13 63 IPR001005 -
Lele23g0410 291 SMART sant 66 114 IPR001005 -
Lele23g0410 291 MobiDBLite consensus disorder prediction 129 184 - -
Lele23g0410 291 MobiDBLite consensus disorder prediction 128 197 - -
Lele23g0410 291 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele23g0410 291 CDD SANT 69 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0410 Lele-ChrLele23 2987824 2989033 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0410 1 266 MYB Transcription Factor Family AT4G38620 55.556 3.60e-90 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele23g0410 Myb_DNA-binding 1e-14 CL0123