Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele23g0379 | ATGCCTTTTGAAATAATGGATCAGAGGGCTGTATCTGCCTCATCACACTTTTTTGATGACATTTCCTTTTGCTCTGAGAAGAATGCCGGATTGCAGAGGCCAAGATCTATTCATGATCACTACCATCAAGGAAAGAATGGAATGGCAGCACCACCTAGCAGCATTTTGAATGCTTTGTCACCTCGGGAAATTGGTGCAAAGACTGGCTGGTCAAAGTCACCAACAGGTCTGTCTGGAGTAACCGTAGAAAAGCTACATGCTGGTGATGAAGGCAATGTTGATATGTTTAAAGCCTCCAAGGAAGCATTGAATCATCATCCCAGATCTCAGTCTAATGTGCGTACTCAGCCAGTGTCTAAACCATATGGTTTGATTGGCAACAAGATCATCACTAATGCTGCCTCACGTGAAAGTAGTTTATTCTCAAGCTCACTATCCGAGATATTTACCCGGAAACTGAGGTTAGCGGAAAATGATGTTCTGCCTCAACAGCCTGTTACTGTTGGTTCCCTTGAGGAGGAACCATACAAATCTCTTGAAGAAATTGAGGCTGACACTATTGGAAATCTCCTTCCTGATGAAGATGATCTATTTTCTGGTGTCATTGATGACTTAGGATTCAATACTCTTGCCGTAACTGGTGATGACGTGGAAGATTTTGATCTGTTTAGCAGTGGTGGAGGCATGGAGCTAGAAGGTGATGGGCATCTAACTTCAGGAAAAAGGACCAGCAGTCCAGATGGAGATCCTGGTTTCTTTGGAGGCTTCAAAGGGAAACTTCCTTTTGGTGAACACCCTTCTAGAACTCTTTTTGTTAGAAACATCAACAGCAATGTTGAAGATTCTGAGCTAAAGGCTCTCTTTGAGCAATATGGTGATGTCCGAACCACTTATACTGCTTGCAAGCATCGTGGATTTGTTATGATTTCTTATTATGATATAAGAGCTGCACAAAATGCAATGAAAGCTCTTCAAAACAGGTCATTGAGGTCTAGGAAACTCGACATACATTATTCAATACCAAAGGTAAATGCTCCAGAGAAGGATATTAGCCATGGCACATTGCTTCTATCTGGTCTTGATTCTTCTGTTTCACATGATGAACTTATACACTTTTTTGGATTTTATGGAGAAATCAAAGAAATTTATGAATCTCCAGAAATGAATTACGACAAATTTATAGAGTTCTATGATGTGAGAGCTGCAGAAGCTGCTCTTCGTGCTTTGAACAAGAGTGAAATTGCTGGGAAGCAGATCAAGCTTGAACCCAGCCATCCTAAGAGTTCAAGTGCAACATGTTTGATGCCGCAGTCTCAGAAGGGAGAGAAGGAGTCTGATCTTAGTCAGACTATGGGTGACAACTTATCATTAAGCCAGAATGCAATAACGTCTTCTGGAGTAATTGCATCTGGCTGCTTGGACAATGGATCTGATCATGGATTTCCAGCAGCTATACGACAAACTGTGGATGCCTTGTCCATGAATGTATTGTCACATGTGAATTCTGGCATTCACAACACAGTGAGAGGGCCATCAATTCCTGGATTCCATCCTCATTCCCTCCCCGAGTATCATGATGGTTTAACTTGTGGCAGTCCTTACAACTTTTCAAGAACCTTTAGCAATGTATCTGGTAATATGGGTCCAAGAGTGACAGATAGCTCTGACAGCAGGCACACTCTGGGATTTGGTTCAACTGGGAAATTGATGGACTTTAATGGAGGAGGAAATGGGAGCCGTCCTAATCCTGTTGGGCTTTATCACATGTGGAGTGGATCGAATTTGCACCAGCAAACTCCACCAGGTCCAATGGTTTGGCAGAAAACACCATCATTTGTTAATGGTGCTTGCTCTCCTTGTCTTCAACCGATGCCTGGCTTTCCCAGATCATCATCTCATATGCTGAGAGCATCACATATAGACCACCATGTTGGATCAGCACCAGTTGTTACAGCCTCCCCATGGGACAGACAACATTCTTATTTGGCAGAGTCCCCTGACTCCTCTGGTTTTCACATGGGTTCTCTTGGTAGTACAGGTTTTCCTGGTACATGGCAATTGCATCCTCCAGAATTTTCTTCTCACAAAATGTTTCCTCATGTTGGTGGGAATGGCATGGATTTGTCTCCCAATGCTGGGCAGAGCTCCCCAAGTCAGTTTTCACATGTTTTCCCTGGGAGACATCCCATGACTTCAATGTCTAAATTTGATTCTACCAATGACAGAATGAGAAACCTCTATCACCGTAGAAGTGATGCTAATACTAACAATGCTGACAAAAAGCAATTTGAACTTGACTTAAGTCGCTTATTGAATGGAGAAGACACACGAACAACACTTATGATTAAGAATATTCCCAACAAGTATACTTCAAAAATGCTTCTTGCTGCCATAGATGAGCAATGTCGGGGAACTTATGATTTCTTGTATTTGCCAATTGATTTCAAGAACAAATGTAATGTTGGCTATGCTTTCATCAACATGACTGATCCTAGTCAGATTATTCCCTTCCACAAGGCTTTTAATGGGAAAAAATGGGAGAAGTTCAACAGTGAAAAGGTGGCTTCACTTGCCTATGCTCGAATTCAGGGAAAAATTGCTCTTATTGCACATTTCCAGAATTCGAGCCTGATGAATGAAGATAAACGTTGCCGCCCTATTCTCTTCCATACAGAGGGCCCAAATGCTGGTGATCCGGAGCCTTTCCCTATGGGTACCAATATTAGATTGAGGCCTGGAAAATCACGTGCTAGGAGCCCATCGGCTTCGACTAGTGGGGAGGAGTCTTCCAATGGATAA | 2799 | 0.4259 | MPFEIMDQRAVSASSHFFDDISFCSEKNAGLQRPRSIHDHYHQGKNGMAAPPSSILNALSPREIGAKTGWSKSPTGLSGVTVEKLHAGDEGNVDMFKASKEALNHHPRSQSNVRTQPVSKPYGLIGNKIITNAASRESSLFSSSLSEIFTRKLRLAENDVLPQQPVTVGSLEEEPYKSLEEIEADTIGNLLPDEDDLFSGVIDDLGFNTLAVTGDDVEDFDLFSSGGGMELEGDGHLTSGKRTSSPDGDPGFFGGFKGKLPFGEHPSRTLFVRNINSNVEDSELKALFEQYGDVRTTYTACKHRGFVMISYYDIRAAQNAMKALQNRSLRSRKLDIHYSIPKVNAPEKDISHGTLLLSGLDSSVSHDELIHFFGFYGEIKEIYESPEMNYDKFIEFYDVRAAEAALRALNKSEIAGKQIKLEPSHPKSSSATCLMPQSQKGEKESDLSQTMGDNLSLSQNAITSSGVIASGCLDNGSDHGFPAAIRQTVDALSMNVLSHVNSGIHNTVRGPSIPGFHPHSLPEYHDGLTCGSPYNFSRTFSNVSGNMGPRVTDSSDSRHTLGFGSTGKLMDFNGGGNGSRPNPVGLYHMWSGSNLHQQTPPGPMVWQKTPSFVNGACSPCLQPMPGFPRSSSHMLRASHIDHHVGSAPVVTASPWDRQHSYLAESPDSSGFHMGSLGSTGFPGTWQLHPPEFSSHKMFPHVGGNGMDLSPNAGQSSPSQFSHVFPGRHPMTSMSKFDSTNDRMRNLYHRRSDANTNNADKKQFELDLSRLLNGEDTRTTLMIKNIPNKYTSKMLLAAIDEQCRGTYDFLYLPIDFKNKCNVGYAFINMTDPSQIIPFHKAFNGKKWEKFNSEKVASLAYARIQGKIALIAHFQNSSLMNEDKRCRPILFHTEGPNAGDPEPFPMGTNIRLRPGKSRARSPSASTSGEESSNG | 932 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele23g0379 | 932 | Gene3D | - | 351 | 449 | IPR012677 | - | |
Lele23g0379 | 932 | SUPERFAMILY | RNA-binding domain, RBD | 779 | 863 | IPR035979 | GO:0003676 | |
Lele23g0379 | 932 | FunFam | Protein MEI2-like 1 | 352 | 448 | - | - | |
Lele23g0379 | 932 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 268 | 341 | IPR000504 | GO:0003723 | |
Lele23g0379 | 932 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 356 | 420 | IPR000504 | GO:0003723 | |
Lele23g0379 | 932 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 270 | 334 | IPR000504 | GO:0003723 | |
Lele23g0379 | 932 | Gene3D | - | 262 | 350 | IPR012677 | - | |
Lele23g0379 | 932 | SUPERFAMILY | RNA-binding domain, RBD | 265 | 428 | IPR035979 | GO:0003676 | |
Lele23g0379 | 932 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 353 | 426 | IPR000504 | GO:0003723 | |
Lele23g0379 | 932 | CDD | RRM3_MEI2_like | 780 | 865 | IPR034454 | - | |
Lele23g0379 | 932 | MobiDBLite | consensus disorder prediction | 891 | 932 | - | - | |
Lele23g0379 | 932 | MobiDBLite | consensus disorder prediction | 917 | 932 | - | - | |
Lele23g0379 | 932 | Pfam | RNA recognition motif 2 | 777 | 873 | IPR007201 | - | |
Lele23g0379 | 932 | MobiDBLite | consensus disorder prediction | 423 | 451 | - | - | |
Lele23g0379 | 932 | FunFam | MEI2-like protein 5 isoform 2 | 257 | 351 | - | - | |
Lele23g0379 | 932 | MobiDBLite | consensus disorder prediction | 420 | 451 | - | - | |
Lele23g0379 | 932 | PANTHER | RNA RECOGNITION MOTIF-CONTAINING | 112 | 923 | - | - | |
Lele23g0379 | 932 | CDD | RRM1_MEI2_like | 267 | 342 | IPR034453 | - | |
Lele23g0379 | 932 | SMART | rrm1_1 | 779 | 855 | IPR000504 | GO:0003723 | |
Lele23g0379 | 932 | SMART | rrm1_1 | 354 | 422 | IPR000504 | GO:0003723 | |
Lele23g0379 | 932 | SMART | rrm1_1 | 269 | 337 | IPR000504 | GO:0003723 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele23g0379 | Lele-ChrLele23 | 2737531 | 2743530 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele23g0379 | 263 | 427 | Eukaryotic Initiation Factors Gene Family | AT3G16380 | 24.731 | 1.09e-06 | 50.4 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele21g1632 | 21 | 24266344 | 24272394 | Lele23g0379 | 23 | 2737531 | 2743530 | hybridization | |
Lele22g1614 | 22 | 21655241 | 21661008 | Lele23g0379 | 23 | 2737531 | 2743530 | hybridization |