Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0371 ATGAACTGGCCGATATGGCGGAAATGGAAGGCCTTGGCCTTGGCCATGGCTATAACGGTGTCGTTTCAGACTTGCTTGGACGCTCATTATCTTTCCTCGCTTGGAGATGCCATTCTCAGGCTTCCTGGCCAGCCCCAAGTTCGCTTTCAGCAGTTCTCAGGATACGTTGAAGTCGACGATAAGAATGAGAAGGCTCTGTTCTACTATTTTGTTGAATCGGACGCTGATCCTGCTTCCAAGCCTCTGGTTCTCTGGCTCAATGGAGGGCCTGGCTGTTCTTCATTGGGTGTAGGTGCATTCTCTGAAAATGGGCCTTTCAGACCAAATGGGGAAGTTCTAATTGAAAACAAGTATAGTTGGAACAAAGAAGCAAACGTGCTGTATTTGGAGACACCAGTTGGAGTGGGGTTCTCTTATGCCAAAGGAAGTTCCTCCCATTTCACAGTAAACGACGAGGCAACAGCCAGGGATAACGTTGTATTCCTGATACGCTGGTTTAGCAAATTCCCTCAGTACAGGCACAGAGGCTTATTTCTGACAGGGGAAAGCTATGCAGGGCATTATGTTCCTCAACTTGCAAAGCTCATGATTGAGATGAACAAAAAGGAGAAGATATTCAATCTTAAAGGCGTAGCTTTGGGTAATCCACTTCTAGAATATGCAACGGATTTCAATTCAAGGGCTGAGTTCTTCTGGTCTCATGGATTGATATCAGATTCAACGTACAAAATGTTCACTAAAGCGTGTAATTATTCTCGGTACGTTAGTGAATACTATAGAGACTCAGTTTCGCCTCTTTGTTCGAAGGTTATGCACCAAGTAGGGAGAGAAACCAGTAAATTTGTGGACAAGTACGATGTTACCCTTGATGTTTGCATTTCATCAGTGCTTTCACAGTCCAAGGTTATTTGTCCTCAAACTGAACAAGCAAATGAGATGGTAGATGTATGCGTAGATGACAAAGTTACAAATTACTTAAACCAAAAAGATGTACGGGAGGCTCTCCATGCTAGGCTTGTTGGAGTTCGCAAGTGGGATGTCTGCAGCAACATTCTGGACTACGATATGCTCAACCTGGAAGTGCCTACCCTCCCTCTCGTTGGATCGCTGATAAAAGCTGGAGTTCAGGTCTTAATTTACAGTGGAGATCAAGATTCTGTTCTTCCTCTGACTGGTAGCCGCACCTTGGTTAAAAAACTGGCAAGGAAATTAGAACTAAATACAACAGTACCTTACAGAGTATGGTTTGCAGGCCAGCAGGTCGGTGGGTGGACTCAAGTTTATGGAAATATCCTCTCATTTGCCACAGTGAGAGGAGCCTCCCATGAAGTTCCATTCTCACAGCCTGAGAGATCCCTTGTGCTCTTCAAGTCATTCTTGGAAGGCGGGCCTCTACCTGATAGAATCTTGACACAAAGTTGA 1422 0.4487 MNWPIWRKWKALALAMAITVSFQTCLDAHYLSSLGDAILRLPGQPQVRFQQFSGYVEVDDKNEKALFYYFVESDADPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGEVLIENKYSWNKEANVLYLETPVGVGFSYAKGSSSHFTVNDEATARDNVVFLIRWFSKFPQYRHRGLFLTGESYAGHYVPQLAKLMIEMNKKEKIFNLKGVALGNPLLEYATDFNSRAEFFWSHGLISDSTYKMFTKACNYSRYVSEYYRDSVSPLCSKVMHQVGRETSKFVDKYDVTLDVCISSVLSQSKVICPQTEQANEMVDVCVDDKVTNYLNQKDVREALHARLVGVRKWDVCSNILDYDMLNLEVPTLPLVGSLIKAGVQVLIYSGDQDSVLPLTGSRTLVKKLARKLELNTTVPYRVWFAGQQVGGWTQVYGNILSFATVRGASHEVPFSQPERSLVLFKSFLEGGPLPDRILTQS 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0371 473 Gene3D alpha/beta hydrolase 37 466 IPR029058 -
Lele23g0371 473 Pfam Serine carboxypeptidase 42 462 IPR001563 GO:0004185|GO:0006508
Lele23g0371 473 FunFam Carboxypeptidase 31 466 - -
Lele23g0371 473 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 39 449 IPR001563 GO:0004185|GO:0006508
Lele23g0371 473 FunFam Carboxypeptidase 363 462 - -
Lele23g0371 473 SUPERFAMILY alpha/beta-Hydrolases 41 465 IPR029058 -
Lele23g0371 473 ProSitePatterns Serine carboxypeptidases, serine active site. 179 186 IPR018202 GO:0004185
Lele23g0371 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 432 445 IPR001563 GO:0004185|GO:0006508
Lele23g0371 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
Lele23g0371 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 128 IPR001563 GO:0004185|GO:0006508
Lele23g0371 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 165 190 IPR001563 GO:0004185|GO:0006508
Lele23g0371 473 ProSitePatterns Serine carboxypeptidases, histidine active site. 432 449 IPR033124 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0371 Lele-ChrLele23 2625620 2628705 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0371 325 465 Calmodulin-binding Proteins AT2G22960 29.078 8.01e-17 76.6