Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0368 ATGACTGTTCTCGATTCTCATGAGCTTTCCCTCACCGGAACCCACTCTCCGGCCGACACCTCGATGGCTCAGACGAACAAGAAGAAGAGGAAGAGGGCAAATAACAGAAATGGTTCTTCCAAGGTGAGAAGAGAGAAAATAAGTGAGAGGATGAGGACGTTGCAGAGACTCGTGCCAGGTTGTGATAAGATAACTGGAAAAGCTCTCGTGTTAGACGAAATCATCAATTATGTTCAGTCCCTTCAGAATCAAGTGGAGTTTTTGTCGATGAAGCTTGCTTCTGTGAATCCCATGTTCGAAGACTTCACAATGGACCAAGATACCCTCATGGCACCAGATGTAGCTTTGCCTCTACCATGTGTTCCACAATGCAGTACCAATTTTGCTCATGACTACAGCCTTTTGGATGATTCAGTCACAGTTTTTCTTCAAGGAGAGAGATCAGATGCCTTCTCTTCCCAGCTGGATTTTGTGGGTGAGTTGTGGGATGGACAAGACCAACGACAAAACTTTCCTAATCCTTGTGCCCTCGGCGCCAACTTATGGTCCTTTCAATCTTAG 561 0.4581 MTVLDSHELSLTGTHSPADTSMAQTNKKKRKRANNRNGSSKVRREKISERMRTLQRLVPGCDKITGKALVLDEIINYVQSLQNQVEFLSMKLASVNPMFEDFTMDQDTLMAPDVALPLPCVPQCSTNFAHDYSLLDDSVTVFLQGERSDAFSSQLDFVGELWDGQDQRQNFPNPCALGANLWSFQS 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0368 186 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 41 127 IPR024097 GO:0006355
Lele23g0368 186 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 31 81 IPR011598 GO:0046983
Lele23g0368 186 Gene3D - 26 103 IPR036638 GO:0046983
Lele23g0368 186 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 28 98 IPR036638 GO:0046983
Lele23g0368 186 MobiDBLite consensus disorder prediction 1 23 - -
Lele23g0368 186 MobiDBLite consensus disorder prediction 1 48 - -
Lele23g0368 186 SMART finulus 37 87 IPR011598 GO:0046983
Lele23g0368 186 Pfam Helix-loop-helix DNA-binding domain 37 82 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0368 Lele-ChrLele23 2591049 2592302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0368 27 139 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50915 53.719 2.71e-33 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele23g0368 HLH 0.00024 No_clan