Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0366 ATGAAAGAATCGGAGAACGACATGCTCAACGTCTCCACTCAGCTTCTTTCTTCTCTTCTGGATGAGATTCCCACCGTTGTTAACTTTAAAGGTAAATGGTGTCTAATTAGAGCCAAACTCTTCGATCTTCAGACTCAGCTCACTGATTTCTCCTCTGAGTTTCCTAATTGCTCGTCCAATTCTCTCTCACTCGAGCTACTTCAGTCCATTTCGCACTCCCTAAACGATGCCGTTTCGCTTGCCAAAGAATGCCAGTCCCCCAACTTATCCCAGGGAAAGCTCAAGACTCAGAGCGACATTGATTCGGTCCTCGCTAAGCTTGATTGCCATGTTAAAGACTGCGAGATTCTGTTCAGGAGTGGGGTTTTGCAGGACGCGGCCGTTTCGAGCGCTTCTAAGAGAGAGGCCGTACGGTCTGAATCCAGGAACTTGATTACTCGTCTGCAGATCGGTTCTGCAGAGTCCAGGAAGTCAGCGATGGACTCCTTGTTGAGTTTACTCGAAGAGGATGATAAGAATGTGATGATAACTGTGGCGCAGGGTGTGGTTCCGGTGCTTGTTCGCTTACTGGATTCTGCCTCTTCCGAGATGAAGGAGAAGACTGTTGCTGCCATCTCCAGTGTCTCCATGGTGGATAGTAGCAAGCATGTTTTGATCGCTGAGGGATTGTTGCTTTTGAATCAATTGGTTCGAGTTCTCGATTCGGGGAGTGGATTTGCCAAACAGAAATCCTGCATAGCTCTCCAGGCTCTAAGTTTCTCCAAAGAAAATGCTAGAGCAATCGGGTCTAGAGGTGGAATCTCGTCACTTTTAGAGATTTGTCAAGCAGGCACTCCTGGTTCCCAAGCTTCGGCAGCAGGGGTTTTAAGAAATCTCTCTGTCTTTCCTGAAATCAGAGAGAATTTTATCGAGGAAAACACTATTGATGTTTTATTGGGGCTCGCCTCATCAGGAACTGCGTTAGCGCAAGAAAATGCAATTGGGTGTTTGTCCAATTTAGTTTCTGAAGACGAAAGTTTAAAACTTTTGTTTGTGAAGGAAGGAGGGATCGAGTGCCTGAAGAATTTTTGGGACTCAGCTCCGACAGTTCAGAGTCTTGAAGTCGCAACTGAGTTGTTGAGTAACCTGGCTTCTAGGTCACCGATTGCTGATGTTCTTGTTTCTGATGGGTTTATACCCCGCCTTGTGGGTGTGTTGAATTGTGGAATTCTAGGGGTGAGAACTGCGGCAGCTCTAGCCGTTTATGCTTTGGGGTTGTACAACACAAAATCGAGGAAGGAGATGGGTGAATGTGGATGTATGACCCCATTGATCAAGATGCTGGATGGCAAAGCTGTAGAAGAGAAAGAAGCAGCTGCAAAAGCGTTGTCGGTGCTCATGTTGTATGCGGCCAATAGAAAAATTTTCCGGAAGGATGAGAGGGGTATAGCTTGTGCTGTTCAGCTGCTGGATCCTTCTGTACTGAATTTGGATAAAAAATATCCTGTTTCAGTGCTGACCTCGCTTGTGCATTCAAAGAAATGCAGGAAACATATGGTGGCGGCCGGTGCTTGTGTATATACGCAGAAACTTGTTGAGATGGATGTTGAGGGTGCCAAGAAACTGTTGGATAGCCTTGGTAGTGGTAAGATATGGGGAGTTTTTGCAAGACCCTAA 1656 0.4632 MKESENDMLNVSTQLLSSLLDEIPTVVNFKGKWCLIRAKLFDLQTQLTDFSSEFPNCSSNSLSLELLQSISHSLNDAVSLAKECQSPNLSQGKLKTQSDIDSVLAKLDCHVKDCEILFRSGVLQDAAVSSASKREAVRSESRNLITRLQIGSAESRKSAMDSLLSLLEEDDKNVMITVAQGVVPVLVRLLDSASSEMKEKTVAAISSVSMVDSSKHVLIAEGLLLLNQLVRVLDSGSGFAKQKSCIALQALSFSKENARAIGSRGGISSLLEICQAGTPGSQASAAGVLRNLSVFPEIRENFIEENTIDVLLGLASSGTALAQENAIGCLSNLVSEDESLKLLFVKEGGIECLKNFWDSAPTVQSLEVATELLSNLASRSPIADVLVSDGFIPRLVGVLNCGILGVRTAAALAVYALGLYNTKSRKEMGECGCMTPLIKMLDGKAVEEKEAAAKALSVLMLYAANRKIFRKDERGIACAVQLLDPSVLNLDKKYPVSVLTSLVHSKKCRKHMVAAGACVYTQKLVEMDVEGAKKLLDSLGSGKIWGVFARP 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0366 551 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 4 549 - -
Lele23g0366 551 Gene3D - 123 238 IPR011989 -
Lele23g0366 551 Gene3D - 240 363 IPR011989 -
Lele23g0366 551 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 181 223 IPR000225 GO:0005515
Lele23g0366 551 SUPERFAMILY ARM repeat 143 489 IPR016024 -
Lele23g0366 551 SMART arm_5 379 419 IPR000225 GO:0005515
Lele23g0366 551 SMART arm_5 337 378 IPR000225 GO:0005515
Lele23g0366 551 SMART arm_5 170 210 IPR000225 GO:0005515
Lele23g0366 551 SMART arm_5 254 294 IPR000225 GO:0005515
Lele23g0366 551 SMART arm_5 421 461 IPR000225 GO:0005515
Lele23g0366 551 SMART arm_5 295 335 IPR000225 GO:0005515
Lele23g0366 551 Gene3D - 364 528 IPR011989 -
Lele23g0366 551 Pfam Armadillo/beta-catenin-like repeat 170 207 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0366 Lele-ChrLele23 2563319 2564974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0366 126 415 U-box Gene Family AT2G23140 26.621 8.72e-17 81.6