Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0365 ATGGACGATGGCTGCCAGCATGAAAATGGTAGGCATAAGGTGGACTATTACAGAGGAGCACATTCCCCGTGGAATATGGCTCCCCAACATCAAGCAAAGGAACCAAATGCCTTAGTTATGAATAAGAAAATCATGTCCATCATAGCTGAAAGGGAGGCTGCTATTCGAGAACGAAATGCGGCTTTATCTGAAAAGAATGAAGCCTTGGCTGCTCGAGATGAGGCCCTTAGGCAGAGGGATGAAGCACTTGTTCAGAGGGATAGTGCCATAATGGAACGGGATAATGCCCTTGCTGCCCTTCAAATCCGAGACAATGCTGTCAATGTCCAATTGGGCAGTGGAATTCAACGCGGGTCGAAGCGAATGCACCATTCCTCAAACCATCTTGTTGAAATGGCAGAAGCTGCATATGGTACAAAGGATACCACCATAACCGAGGCCTTCCCGGTGACTGTAATAAATTCTGAAGCCGTTAAATCTCATCAGGCAAAGAGAAAAAAGGAAGACAATGCAATTTCTTCTAAGGCGTTGAAGAGCAGAGGAAAGAAGATGGGTGAGGATTTAAATAGGTCAGCTTCTTCTGAAGGAACTAAAATTAAATCTGAGTGGGATAGACAGGATATTGGCTTGAATTTGGTTACATTTGATGAAACTACCATGCCAGCCCCTGTCTGCACATGCACTGGAGTACCAAGACAGTGCTACAAATGGGGAAACGGCGGATGGCAGTCATCCTGTTGTACCACCTCCTTGTCAATGTATCCATTGCCACAGCTTCCAAACAAGCGCCATTCTCGAATCGGTGGCCGGAAGATGAGTGGAAGTGTCTTTACAAGATTGCTCAGTAGGGTAGCAGCAGAAGGGCAAGATTTATCTATACCATTGGATCTCAAGGAATACTGGGCCAGACATGGGACAAATCGCTACATCACGATCAAGTAG 942 0.4597 MDDGCQHENGRHKVDYYRGAHSPWNMAPQHQAKEPNALVMNKKIMSIIAEREAAIRERNAALSEKNEALAARDEALRQRDEALVQRDSAIMERDNALAALQIRDNAVNVQLGSGIQRGSKRMHHSSNHLVEMAEAAYGTKDTTITEAFPVTVINSEAVKSHQAKRKKEDNAISSKALKSRGKKMGEDLNRSASSEGTKIKSEWDRQDIGLNLVTFDETTMPAPVCTCTGVPRQCYKWGNGGWQSSCCTTSLSMYPLPQLPNKRHSRIGGRKMSGSVFTRLLSRVAAEGQDLSIPLDLKEYWARHGTNRYITIK 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0365 313 SMART GAGA_bind_2 1 313 IPR010409 -
Lele23g0365 313 PANTHER - 1 313 IPR010409 -
Lele23g0365 313 Coils Coil 59 79 - -
Lele23g0365 313 MobiDBLite consensus disorder prediction 161 200 - -
Lele23g0365 313 Pfam GAGA binding protein-like family 1 313 IPR010409 -
Lele23g0365 313 MobiDBLite consensus disorder prediction 161 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0365 Lele-ChrLele23 2556500 2557538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0365 1 313 BBR or BPC Transcription factor family AT2G21240 59.236 4.01e-135 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Lele23g0365 GAGA_bind 1.8e-99 No_clan