Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0349 ATGAAAGCAGCGTCATGGGATTTGGGTGAATTAGACGAAGCAACAACAGGCTTACCCAGCATAGAAGAAACAATTGATGGGTCAAGCAGAAGATTTGGTGATGATAGAAGTAATAAAGGGGAATTTTCTGTGGATTTGAAGCTTGGTACTCAAGTGGGGAATTCTAGTAGTAATGAACCAGCAATCTCTAAGTGGAAAGATGTTGTTGGAGGAGTCTCCAAAGTGATGATGTCATCTTCTTCTTCATTATCGTCTTCCTCAGGATCATCTAAGAGAGCTCGAGCAATTAATAATGGAAGCCACACAGTGTCATGTCTTGTAGATGGGTGCAACTCAGATCTTAGTAATTGCAGGGACTATCACAGGCGCCATAAGGTCTGCGAACTCCATTCTAAGACTCCAGTGGTCACAATTAACGGCAACAAGCAAAGGTTCTGTCAACAGTGTAGCAGGTTTCATTCGCTAGAGGAATTTGATGAAGGGAAGAGAAGTTGCAGGAAGCGATTAGATGGACACAACCGACGGAGGAGGAAGCCGCAGGGAGAAGGAGCAGGGGGAGGGAGATCTGGAAGCTTTTTGTCCAATTACCAAGGTAGAGGCACCAACTTCTTGCCCTTCTCAAGCTCACATGTATATCCTTCCACTGCTATGGCGCACCCTCCTTGGGATTCATCAGATGTTAGGCTCCACCACAACCCTCATCATCATTATCTCCATCCCCTGGTTGATCATCTAGGATCGTCGTCCTCATCATCCTATACAGAAGCAAGTAATAATAATAACATCATTAATGCTAACAAGCATCAGCAGCTGGCATTCTTGCAAGGTGACAACTCAACAACAATGGAGAACAACAATCAGCAAGCTCTACCTCCACCACCTGCTTCTGTGTGCCAAACGTTTCTGAGAGCCACGCCATTATTGCCAGCAGCTCCACCACTTCACGGCGGCGAGGGCGACCACCATGATTCTCACTGTGCTCTCTCTCTTCTGTCATCCCCACAGACGCCGCACACAAGGGGGAATGGTTTGAGCCAAATGTTGCAGCCTCATCAACAAGGCATGTCGATTATGCAGCAGCAAAACCCACCCTTAGGATTGAGCCTGCATGATCATGGCCTTGAGACGGTGGACCCGGCGGCCGTCTTGGTTCACGATGGCAGTGACCATTGCCCGACAATGTATAACATGAATGAGGCCCCTCCATTTCCTTTTCATTGGGAATAG 1227 0.4743 MKAASWDLGELDEATTGLPSIEETIDGSSRRFGDDRSNKGEFSVDLKLGTQVGNSSSNEPAISKWKDVVGGVSKVMMSSSSSLSSSSGSSKRARAINNGSHTVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPVVTINGNKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQGEGAGGGRSGSFLSNYQGRGTNFLPFSSSHVYPSTAMAHPPWDSSDVRLHHNPHHHYLHPLVDHLGSSSSSSYTEASNNNNIINANKHQQLAFLQGDNSTTMENNNQQALPPPPASVCQTFLRATPLLPAAPPLHGGEGDHHDSHCALSLLSSPQTPHTRGNGLSQMLQPHQQGMSIMQQQNPPLGLSLHDHGLETVDPAAVLVHDGSDHCPTMYNMNEAPPFPFHWE 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0349 408 MobiDBLite consensus disorder prediction 169 194 - -
Lele23g0349 408 FunFam Squamosa promoter-binding-like protein 14 96 166 - -
Lele23g0349 408 Gene3D - 96 166 IPR036893 GO:0003677|GO:0005634
Lele23g0349 408 SUPERFAMILY SBT domain 103 182 IPR036893 GO:0003677|GO:0005634
Lele23g0349 408 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 45 388 IPR044817 GO:0003677
Lele23g0349 408 ProSiteProfiles Zinc finger SBP-type profile. 102 179 IPR004333 GO:0003677
Lele23g0349 408 Pfam SBP domain 105 178 IPR004333 GO:0003677
Lele23g0349 408 MobiDBLite consensus disorder prediction 17 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0349 Lele-ChrLele23 2439698 2443099 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0349 25 408 SBP-box Gene Family AT5G50670 39.558 2.15e-63 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele23g0349 SBP 4.9e-31 No_clan