Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0342 ATGGAGAATCACCAGCAAGCCCCACCTTCCTCCGCATACCCACCTCAGCCCCCTGCTCCTCCTTCTTCCTTCCACCACCTTCTTCAACAGCAGCAACTCCAGCTTCACACCTTCTGGAACACCCAGCGCCAAGAGATCGAGCATGTCAACGATTTCAAGAACCACCAGCTCCCTCTCGCCCGCATCAAGAAGATCATGAAGGCCGACGAGGACGTCCGCATGATCTCCGCCGAAGCCCCCATTTTGTTCGCCAAGGCCTGCGAGCTTTTCATCCTCGAGCTCACCATTCGATCCTGGCTTCACGCTGAAGAGAACAAGAGGCGCACTCTCCAGAAGAACGACATCGCTGCTGCCATCACACGCACTGATATTTTCGATTTCTTGGTTGATATTGTGCCTAGGGACGAGATCAAGGACGAGGCTGCCCTTGCTGGAATGATGGCGGCCCCCGCCAGCGGTGTTCCTTACCACTATCCGTCTATGGGCCAACCTGCCGTCCCTCCCGGTGGCATGATGATTGGACGGCCGGCGGTGGATCCCAACGGATTGTACGCGCAACCGCCTTCGCAAGCGTGGCAGTCAGTGTGGCAGACGGCGCCGGATGATGTGTCCTACGGCAGCGGCGAGAGCAGTGGCCAGGGCAATCTTGATGGTCAGAGGTAG 663 0.5807 MENHQQAPPSSAYPPQPPAPPSSFHHLLQQQQLQLHTFWNTQRQEIEHVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAALAGMMAAPASGVPYHYPSMGQPAVPPGGMMIGRPAVDPNGLYAQPPSQAWQSVWQTAPDDVSYGSGESSGQGNLDGQR 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0342 220 MobiDBLite consensus disorder prediction 1 24 - -
Lele23g0342 220 FunFam Nuclear transcription factor Y subunit gamma 24 134 - -
Lele23g0342 220 Pfam Core histone H2A/H2B/H3/H4 26 119 IPR007125 GO:0003677
Lele23g0342 220 Gene3D Histone, subunit A 22 134 IPR009072 GO:0046982
Lele23g0342 220 MobiDBLite consensus disorder prediction 200 220 - -
Lele23g0342 220 SUPERFAMILY Histone-fold 19 128 IPR009072 GO:0046982
Lele23g0342 220 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 30 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0342 Lele-ChrLele23 2394148 2394810 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0342 22 219 CCAAT-HAP5 Transcription Factor Family AT3G48590 86.275 2.26e-108 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Lele23g0342 Histone 1.2e-17 CL0012