Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0336 ATGGCGTCTCTACTACATACCCCAACCTCACTCCAATCCAACCACTCTCCACTCCCCAGAAACTTCGTATCCCCTAAACCCCTCGCCAACCTCTCGTTTTCCGCCTCTACCTTCCCTTCTTCTTTCCAACTCAATCTCGCCGCCGCCACTGGCCGCCGCTCCCATGGAGGCGTTCTCGGAGCTAAGATGGTTTCCAGCGCCGCCGCCAGCTACGCCCTCGCTCTCGCCGACGTTGCCAAGGCCAACAACACCCTCGACTCCACAACCGCCGATATCGAGAAAATCGAGGAAATCTTCGCCGACCCTGGGGTATTCTCCTTTTTCAACAACCCTACTATAGAAACAGAAAAGAAGAAAAAGGTTGTGGACGAAATCGCCACTTCCTCCAGCTTGCAGCCTCACACTCAAAACTTCCTCAAGATTTTGGTGGATGCGAAGAGAATCGATCTGATCAATGACATAGCGAAGGAGTATGAGTTCGTGTATAACGATTTGACGGACACGGAGCTTGCGATCGTGAGCTCGGTGGTGAAGCTGGAATCGCAGCACTTGGCTCAGATAGCGAAGCAGGTGCAGAAGCTGACTGGTGCGAAGAATGTGAGAATTAAGACATTGATTGATCCAAGTTTGGTGGCTGGCTTCACAATCAGGTATGGGAATTCGGGATCTAAGTTGATTGATATGAGTGTGAAGAAGCAACTTGAAGAAATTGCTGCTCAGCTTGATTTGGGCGATATCACACTCAATGTATGA 753 0.5046 MASLLHTPTSLQSNHSPLPRNFVSPKPLANLSFSASTFPSSFQLNLAAATGRRSHGGVLGAKMVSSAAASYALALADVAKANNTLDSTTADIEKIEEIFADPGVFSFFNNPTIETEKKKKVVDEIATSSSLQPHTQNFLKILVDAKRIDLINDIAKEYEFVYNDLTDTELAIVSSVVKLESQHLAQIAKQVQKLTGAKNVRIKTLIDPSLVAGFTIRYGNSGSKLIDMSVKKQLEEIAAQLDLGDITLNV 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0336 250 Gene3D - 67 159 IPR026015 -
Lele23g0336 250 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 200 219 IPR020781 GO:0015986|GO:0016020|GO:0046933
Lele23g0336 250 Hamap ATP synthase subunit delta [atpD]. 63 243 IPR000711 GO:0015986|GO:0046933
Lele23g0336 250 TIGRFAM ATP_synt_delta: ATP synthase F1, delta subunit 68 241 IPR000711 GO:0015986|GO:0046933
Lele23g0336 250 Coils Coil 78 98 - -
Lele23g0336 250 PRINTS ATP synthase delta subunit signature 67 86 IPR000711 GO:0015986|GO:0046933
Lele23g0336 250 PRINTS ATP synthase delta subunit signature 147 161 IPR000711 GO:0015986|GO:0046933
Lele23g0336 250 PRINTS ATP synthase delta subunit signature 198 213 IPR000711 GO:0015986|GO:0046933
Lele23g0336 250 PRINTS ATP synthase delta subunit signature 216 234 IPR000711 GO:0015986|GO:0046933
Lele23g0336 250 PRINTS ATP synthase delta subunit signature 136 147 IPR000711 GO:0015986|GO:0046933
Lele23g0336 250 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 64 166 IPR026015 -
Lele23g0336 250 Pfam ATP synthase delta (OSCP) subunit 68 241 IPR000711 GO:0015986|GO:0046933
Lele23g0336 250 PANTHER ATP SYNTHASE DELTA CHAIN 48 242 IPR000711 GO:0015986|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0336 Lele-ChrLele23 2347923 2348675 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0336 1 248 Primary Pumps ATPases AT4G09650 59.677 7.59e-97 281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1676 21 24735980 24736819 Lele23g0336 23 2347923 2348675 hybridization
Lele22g1653 22 22064219 22069501 Lele23g0336 23 2347923 2348675 hybridization