Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0328 ATGGCAGTCACACTGGCTAATGTTAACTCTGCTTCTGGCTTGAAAAAGCTTGATGAATACCTTGTCACCCGCAGTTATATTACTGGGTATCAAGCTTCTAAGGACGATATCACAGTATATGCAGCCTTGTCTCAGGCCCCATCGGCTGAATATGTGAACGCTTCCCGTTGGTACAAGCACATTGATGCTTTATTGAGAATCTCGGGTGTATCTGGTGACGTATCTGGAGTCAAAGTGGAGGGATCTATGCCCGCAGCAGACGAGACCATTGTCACTCCTCCACCTGCTGACACAAAGGCCACATCTGCTGAGGATGACGATGATGATGTGGATTTGTTTGGGGAAGAGACAGAAGAGGAGAAGAAGGCTGCTGAAGAAAGGGCAGCTGCCGTTAAGGCATCTTCAAAGAAGAAAGAATCTGGGAAGTCATCTGTTTTGCTGGATGTGAAGCCCTGGGATGATGAAACAGACATGAAGAAGCTTGAAGAAGCAGTGAGAAGTGTTCAGATGGAAGGATTGCTTTGGGGTGCTTCCAAACTTGCCCCTGTTGGGTACGGTATCAAGAAGATGCAAATTATGCTTACTATAGTGGATGACCTTGTCTCTGTTGACACCCTCATCGAGGAACAGCTCATGAGCGAGCCAATTAATGAATATGTCCAGAGCTGTGACATTGTGGCCTTCAACAAAATATAATCTGGGATTCGGTAG 711 0.4641 MAVTLANVNSASGLKKLDEYLVTRSYITGYQASKDDITVYAALSQAPSAEYVNASRWYKHIDALLRISGVSGDVSGVKVEGSMPAADETIVTPPPADTKATSAEDDDDDVDLFGEETEEEKKAAEERAAAVKASSKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKMQIMLTIVDDLVSVDTLIEEQLMSEPINEYVQSCDIVAFNKIXSGIR 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0328 236 SUPERFAMILY eEF-1beta-like 139 231 IPR036219 -
Lele23g0328 236 Coils Coil 114 134 - -
Lele23g0328 236 FunFam Elongation factor 1-delta 1 3 78 - -
Lele23g0328 236 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 2. 220 231 IPR001326 GO:0003746|GO:0005853|GO:0006414
Lele23g0328 236 CDD EF1B 145 231 IPR014038 GO:0003746|GO:0006414
Lele23g0328 236 Pfam EF-1 guanine nucleotide exchange domain 144 231 IPR014038 GO:0003746|GO:0006414
Lele23g0328 236 Gene3D - 135 231 IPR014717 -
Lele23g0328 236 SMART EF1_GNE_2 142 231 IPR014038 GO:0003746|GO:0006414
Lele23g0328 236 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 1. 106 114 IPR001326 GO:0003746|GO:0005853|GO:0006414
Lele23g0328 236 FunFam Elongation factor 1-beta 1 like 136 231 - -
Lele23g0328 236 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 8 231 - -
Lele23g0328 236 SUPERFAMILY GST C-terminal domain-like 8 68 IPR036282 -
Lele23g0328 236 Gene3D - 2 79 - -
Lele23g0328 236 MobiDBLite consensus disorder prediction 85 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0328 Lele-ChrLele23 2292186 2293938 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0328 5 231 Eukaryotic Initiation Factors Gene Family AT2G18110 78.070 1.64e-115 328